RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 ZMYND15Q9H091 742 aa18.05■□□□□ 0.48
DDR1-241ENST00000460944 RAB17Q9H0T7 212 aa18.05■□□□□ 0.48
DDR1-241ENST00000460944 POT1Q9NUX5 634 aa18.05■□□□□ 0.48
DDR1-241ENST00000460944 KCNK4Q9NYG8 393 aa18.05■□□□□ 0.48
DDR1-241ENST00000460944 SCHIP1Q9P0W5 487 aaPredicted RBP18.05■□□□□ 0.48
DDR1-241ENST00000460944 MARCH4Q9P2E8 410 aaPredicted RBP18.05■□□□□ 0.48
DDR1-241ENST00000460944 CPNE7Q9UBL6 633 aa18.05■□□□□ 0.48
DDR1-241ENST00000460944 UTP11Q9Y3A2 253 aaKnown RBP18.05■□□□□ 0.48
DDR1-241ENST00000460944 SPEGQ15772 3267 aa18.05■□□□□ 0.48
DDR1-241ENST00000460944 NTN3O00634 580 aaPredicted RBP18.04■□□□□ 0.48
DDR1-241ENST00000460944 PRMT5O14744 637 aaPredicted RBP18.04■□□□□ 0.48
DDR1-241ENST00000460944 OR1I1O60431 355 aa18.04■□□□□ 0.48
DDR1-241ENST00000460944 BRAFP15056 766 aa18.04■□□□□ 0.48
DDR1-241ENST00000460944 XRCC1P18887 633 aaPredicted RBP18.04■□□□□ 0.48
DDR1-241ENST00000460944 ARNTP27540 789 aa18.04■□□□□ 0.48
DDR1-241ENST00000460944 RPL21P46778 160 aaKnown RBP18.04■□□□□ 0.48
DDR1-241ENST00000460944 OR1D5P58170 312 aa18.04■□□□□ 0.48
DDR1-241ENST00000460944 UBE2IP63279 158 aaKnown RBP18.04■□□□□ 0.48
DDR1-241ENST00000460944 TARDBPQ13148 414 aaKnown RBP eCLIP18.04■□□□□ 0.48
DDR1-241ENST00000460944 THOC5Q13769 683 aaKnown RBP18.04■□□□□ 0.48
DDR1-241ENST00000460944 LONRF1Q17RB8 773 aa18.04■□□□□ 0.48
DDR1-241ENST00000460944 AMZ1Q400G9 498 aa18.04■□□□□ 0.48
DDR1-241ENST00000460944 MAP9Q49MG5 647 aa18.04■□□□□ 0.48
DDR1-241ENST00000460944 RNF187Q5TA31 235 aaPredicted RBP18.04■□□□□ 0.48
DDR1-241ENST00000460944 CCNI2Q6ZMN8 369 aaPredicted RBP18.04■□□□□ 0.48
DDR1-241ENST00000460944 LDB1Q86U70 411 aaPredicted RBP18.04■□□□□ 0.48
DDR1-241ENST00000460944 AHCYL2Q96HN2 611 aaKnown RBP18.04■□□□□ 0.48
DDR1-241ENST00000460944 TRIM56Q9BRZ2 755 aaKnown RBP18.04■□□□□ 0.48
DDR1-241ENST00000460944 DPH5Q9H2P9 285 aa18.04■□□□□ 0.48
DDR1-241ENST00000460944 PSMD13Q9UNM6 376 aa18.04■□□□□ 0.48
DDR1-241ENST00000460944 MRFAP1Q9Y605 127 aa18.04■□□□□ 0.48
DDR1-241ENST00000460944 PRSS21Q9Y6M0 314 aa18.04■□□□□ 0.48
DDR1-241ENST00000460944 A0A1W2PQM1 296 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 OR52A4PA6NMU1 304 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 D6RAR5 112 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 GOLGA8KD6RF30 607 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 GOLGA8TH3BQL2 631 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 CSO75390 466 aaKnown RBP18.03■□□□□ 0.48
DDR1-241ENST00000460944 TTC4O95801 387 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 OGNP20774 298 aaKnown RBP18.03■□□□□ 0.48
DDR1-241ENST00000460944 SLC19A1P41440 591 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 ARCN1P48444 511 aaKnown RBP18.03■□□□□ 0.48
DDR1-241ENST00000460944 GPLD1P80108 840 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 CLPPQ16740 277 aaPredicted RBP18.03■□□□□ 0.48
DDR1-241ENST00000460944 SYTL3Q4VX76 610 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 NEPROQ6NW34 567 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 C8orf74Q6P047 294 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 LRRC6Q86X45 466 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 ZNF761Q86XN6 746 aaPredicted RBP18.03■□□□□ 0.48
DDR1-241ENST00000460944 RBM12BQ8IXT5 1001 aaKnown RBP18.03■□□□□ 0.48
DDR1-241ENST00000460944 AGGF1Q8N302 714 aaeCLIP18.03■□□□□ 0.48
DDR1-241ENST00000460944 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.03■□□□□ 0.48
DDR1-241ENST00000460944 OR10G6Q8NH81 332 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 GABPB2Q8TAK5 448 aaPredicted RBP18.03■□□□□ 0.48
DDR1-241ENST00000460944 ELMO1Q92556 727 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 LRRC39Q96DD0 335 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 TCF12Q99081 682 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 EBNA1BP2Q99848 306 aaKnown RBP18.03■□□□□ 0.48
DDR1-241ENST00000460944 WWP1Q9H0M0 922 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 COG4Q9H9E3 785 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 C20orf96Q9NUD7 363 aaPredicted RBP18.03■□□□□ 0.48
DDR1-241ENST00000460944 IMP3Q9NV31 184 aaKnown RBP18.03■□□□□ 0.48
DDR1-241ENST00000460944 WHRNQ9P202 907 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 ZNF624Q9P2J8 865 aaPredicted RBP18.03■□□□□ 0.48
DDR1-241ENST00000460944 GNPTGQ9UJJ9 305 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 VPS9D1Q9Y2B5 631 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 WDR37Q9Y2I8 494 aa18.03■□□□□ 0.48
DDR1-241ENST00000460944 ZCWPW2A0A1B0GU75 182 aa18.02■□□□□ 0.48
DDR1-241ENST00000460944 UBA6A0AVT1 1052 aaPredicted RBP18.02■□□□□ 0.48
DDR1-241ENST00000460944 LILRA5A6NI73 299 aa18.02■□□□□ 0.48
DDR1-241ENST00000460944 LIN7AO14910 233 aaPredicted RBP18.02■□□□□ 0.48
DDR1-241ENST00000460944 EPHA4P54764 986 aa18.02■□□□□ 0.48
DDR1-241ENST00000460944 RPA4Q13156 261 aa18.02■□□□□ 0.48
DDR1-241ENST00000460944 CLCA4Q14CN2 919 aa18.02■□□□□ 0.48
DDR1-241ENST00000460944 ISXQ2M1V0 245 aa18.02■□□□□ 0.48
DDR1-241ENST00000460944 TYSND1Q2T9J0 566 aa18.02■□□□□ 0.48
DDR1-241ENST00000460944 PTRHD1Q6GMV3 140 aaKnown RBP18.02■□□□□ 0.48
DDR1-241ENST00000460944 MARCH9Q86YJ5 346 aa18.02■□□□□ 0.48
DDR1-241ENST00000460944 LMNTD2Q8IXW0 634 aa18.02■□□□□ 0.48
DDR1-241ENST00000460944 GPR150Q8NGU9 434 aa18.02■□□□□ 0.48
DDR1-241ENST00000460944 CALML6Q8TD86 181 aa18.02■□□□□ 0.48
DDR1-241ENST00000460944 GRAMD1AQ96CP6 724 aa18.02■□□□□ 0.48
DDR1-241ENST00000460944 C12orf66Q96MD2 445 aa18.02■□□□□ 0.48
DDR1-241ENST00000460944 FCRL3Q96P31 734 aaPredicted RBP18.02■□□□□ 0.48
DDR1-241ENST00000460944 UCK1Q9HA47 277 aa18.02■□□□□ 0.48
DDR1-241ENST00000460944 FAM169AQ9Y6X4 670 aa18.02■□□□□ 0.48
DDR1-241ENST00000460944 CHD8Q9HCK8 2581 aa18.02■□□□□ 0.47
DDR1-241ENST00000460944 COL27A1Q8IZC6 1860 aaPredicted RBP18.01■□□□□ 0.47
DDR1-241ENST00000460944 IGHV1OR21-1A0A087WYE8 117 aa18.01■□□□□ 0.47
DDR1-241ENST00000460944 CTAGE15A4D2H0 777 aa18.01■□□□□ 0.47
DDR1-241ENST00000460944 TMX2-CTNND1H3BSU7 103 aa18.01■□□□□ 0.47
DDR1-241ENST00000460944 IFRD1O00458 451 aaPredicted RBP18.01■□□□□ 0.47
DDR1-241ENST00000460944 B4GAT1O43505 415 aa18.01■□□□□ 0.47
DDR1-241ENST00000460944 DUX1O43812 170 aa18.01■□□□□ 0.47
DDR1-241ENST00000460944 BANF1O75531 89 aa18.01■□□□□ 0.47
DDR1-241ENST00000460944 CPNE6O95741 557 aa18.01■□□□□ 0.47
DDR1-241ENST00000460944 CTAGE8P0CG41 777 aa18.01■□□□□ 0.47
DDR1-241ENST00000460944 MTHFD1P11586 935 aaKnown RBP18.01■□□□□ 0.47
DDR1-241ENST00000460944 RPS3P23396 243 aaKnown RBP eCLIP18.01■□□□□ 0.474e-7■■■□□ 18.1
DDR1-241ENST00000460944 MAPK9P45984 424 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms