RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 NFKBIL1Q9UBC1 381 aaPredicted RBP11.34□□□□□ -0.59
PCYT1A-213ENST00000460827 OSGIN2Q9Y236 505 aa11.34□□□□□ -0.59
PCYT1A-213ENST00000460827 BTRCQ9Y297 605 aa11.34□□□□□ -0.59
PCYT1A-213ENST00000460827 UBA6A0AVT1 1052 aaPredicted RBP11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 OR5K3A6NET4 321 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 TMCO5BA8MYB1 307 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 PRSS44E7EML9 344 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 MATN3O15232 486 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 VEGFDO43915 354 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 MFSD11O43934 449 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 CDK14O94921 469 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 ZBTB11O95625 1053 aaPredicted RBP11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 ALPPP05187 535 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 HLA-DQB2P05538 268 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 CA4P22748 312 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 ITGA3P26006 1051 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 GLRBP48167 497 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 GALNT2Q10471 571 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 NCF4Q15080 339 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 LLGL1Q15334 1064 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 RPE65Q16518 533 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 ZXDCQ2QGD7 858 aaPredicted RBP11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 PTCHD3Q3KNS1 767 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 ANO6Q4KMQ2 910 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 BOLA3Q53S33 107 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 ZNF789Q5FWF6 425 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 DCAF10Q5QP82 559 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 CDKAL1Q5VV42 579 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 PDPK2PQ6A1A2 396 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 FBXO38Q6PIJ6 1188 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 GALNT16Q8N428 558 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 HSPH1Q92598 858 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 NUP85Q9BW27 656 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 AGPAT4Q9NRZ5 378 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 RBM22Q9NW64 420 aaKnown RBP eCLIP11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 HRASLS2Q9NWW9 162 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 AMACRQ9UHK6 382 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 TTLL3Q9Y4R7 772 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 NUP210LQ5VU65 1888 aa11.33□□□□□ -0.6
PCYT1A-213ENST00000460827 ZNF469Q96JG9 3925 aaPredicted RBP11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 HEATR9A2RTY3 570 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 DDX3YO15523 660 aaKnown RBP11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 KLF7O75840 302 aaPredicted RBP11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 RARAP10276 462 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 HALP42357 657 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 ZNF165P49910 485 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 KPNA2P52292 529 aaKnown RBP11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 PLCL1Q15111 1095 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 FKBP15Q5T1M5 1219 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 ZNF385CQ66K41 422 aaPredicted RBP11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 HGSNATQ68CP4 663 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 IRF2BP2Q7Z5L9 587 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 RAB43Q86YS6 212 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 CARFQ8N187 725 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 TTC30BQ8N4P2 665 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 NEK11Q8NG66 645 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 OR1L3Q8NH93 324 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 FATE1Q969F0 183 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 ZNF653Q96CK0 615 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 CLIP3Q96DZ5 547 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 LURAP1Q96LR2 239 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 TLR10Q9BXR5 811 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 ZFYVE1Q9HBF4 777 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 CSAG2Q9Y5P2 127 aa11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 SNRNP200O75643 2136 aaKnown RBP11.32□□□□□ -0.6
PCYT1A-213ENST00000460827 MASP2O00187 686 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 STSP08842 583 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 PIRTP0C851 137 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 BPIP17213 487 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 VCLP18206 1134 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 OTX2P32243 289 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 CD86P42081 329 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 SOX8P57073 446 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 DMPKQ09013 629 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 TMEM115Q12893 351 aaPredicted RBP11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 GALNT3Q14435 633 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 TMTC4Q5T4D3 741 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 FAM83HQ6ZRV2 1179 aaPredicted RBP11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 TMC3Q7Z5M5 1100 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 TRAPPC5Q8IUR0 188 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 ZADH2Q8N4Q0 377 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 LRRN4Q8WUT4 740 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 TSGA13Q96PP4 275 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 TRIB3Q96RU7 358 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 RUBCNLQ9H714 662 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 ACTR5Q9H9F9 607 aaPredicted RBP11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 SOHLH2Q9NX45 425 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 COPG2Q9UBF2 871 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 PSMD13Q9UNM6 376 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 SHOC2Q9UQ13 582 aa11.31□□□□□ -0.6
PCYT1A-213ENST00000460827 OR6C74A6NCV1 312 aa11.3□□□□□ -0.6
PCYT1A-213ENST00000460827 SLC9B1P1A6NJY1 282 aa11.3□□□□□ -0.6
PCYT1A-213ENST00000460827 TMEM150CB9EJG8 249 aa11.3□□□□□ -0.6
PCYT1A-213ENST00000460827 IPO13O94829 963 aaKnown RBP11.3□□□□□ -0.6
PCYT1A-213ENST00000460827 SLC4A1P02730 911 aa11.3□□□□□ -0.6
PCYT1A-213ENST00000460827 FTLP02792 175 aaPredicted RBP11.3□□□□□ -0.6
PCYT1A-213ENST00000460827 CD48P09326 243 aa11.3□□□□□ -0.6
PCYT1A-213ENST00000460827 MSL3P1P0C860 447 aa11.3□□□□□ -0.6
PCYT1A-213ENST00000460827 MTHFD1P11586 935 aaKnown RBP11.3□□□□□ -0.6
PCYT1A-213ENST00000460827 EDN3P14138 238 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms