RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 SHCBP1LQ9BZQ2 653 aa13.91□□□□□ -0.18
ERCC3-205ENST00000460485 CIPCQ9C0C6 399 aa13.91□□□□□ -0.18
ERCC3-205ENST00000460485 OBP2AQ9NY56 170 aa13.91□□□□□ -0.18
ERCC3-205ENST00000460485 PLK2Q9NYY3 685 aa13.91□□□□□ -0.18
ERCC3-205ENST00000460485 SUCOQ9UBS9 1254 aaKnown RBP13.91□□□□□ -0.18
ERCC3-205ENST00000460485 NKX1-2Q9UD57 310 aaPredicted RBP13.91□□□□□ -0.18
ERCC3-205ENST00000460485 MCM8Q9UJA3 840 aa13.91□□□□□ -0.18
ERCC3-205ENST00000460485 FBXO10Q9UK96 956 aa13.91□□□□□ -0.18
ERCC3-205ENST00000460485 POMPQ9Y244 141 aa13.91□□□□□ -0.18
ERCC3-205ENST00000460485 SLC27A6Q9Y2P4 619 aa13.91□□□□□ -0.18
ERCC3-205ENST00000460485 NDUFAF1Q9Y375 327 aa13.91□□□□□ -0.18
ERCC3-205ENST00000460485 DNAJC15Q9Y5T4 150 aa13.91□□□□□ -0.18
ERCC3-205ENST00000460485 DOCK6Q96HP0 2047 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 PABPN1LA6NDY0 278 aaKnown RBP13.9□□□□□ -0.18
ERCC3-205ENST00000460485 H0Y3Z8 333 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 CDC7O00311 574 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 IFRD1O00458 451 aaPredicted RBP13.9□□□□□ -0.18
ERCC3-205ENST00000460485 TRIM38O00635 465 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 AIM2O14862 343 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 SLC16A5O15375 505 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 OR1I1O60431 355 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 KRT36O76013 467 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 WDR47O94967 919 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 CLDN7O95471 211 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 STAMBPO95630 424 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 PRR35P0CG20 571 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 MPC1LP0DKB6 136 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 ANPEPP15144 967 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 VCLP18206 1134 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 ATP6V1C1P21283 382 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 ME2P23368 584 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 VIPR1P32241 457 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 CDKN1CP49918 316 aaPredicted RBP13.9□□□□□ -0.18
ERCC3-205ENST00000460485 EIF4HQ15056 248 aaKnown RBP13.9□□□□□ -0.18
ERCC3-205ENST00000460485 TAF11Q15544 211 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 MMEL1Q495T6 779 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 XKR7Q5GH72 579 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 PIGGQ5H8A4 983 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 IRAK1BP1Q5VVH5 260 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 LRRC66Q68CR7 880 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 SULT1C3Q6IMI6 304 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 CRTC1Q6UUV9 634 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 PRR23BQ6ZRT6 265 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 UBALD2Q8IYN6 164 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 CATSPER1Q8NEC5 780 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 EEF1AKMT1Q8WVE0 214 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 DNAJC9Q8WXX5 260 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 BHMTQ93088 406 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 EID2BQ96D98 161 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 HGH1Q9BTY7 390 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 TNKS2Q9H2K2 1166 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 MUC13Q9H3R2 512 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 ZDHHC6Q9H6R6 413 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 S100A14Q9HCY8 104 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 HCFC1R1Q9NWW0 138 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 ERVW-1Q9UQF0 538 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 ANKRD12Q6UB98 2062 aa13.9□□□□□ -0.18
ERCC3-205ENST00000460485 MUC22E2RYF6 1773 aaPredicted RBP13.89□□□□□ -0.19
ERCC3-205ENST00000460485 NPIPB15A6NHN6 443 aaPredicted RBP13.89□□□□□ -0.19
ERCC3-205ENST00000460485 UPK3BL1B0FP48 263 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 UPK3BL2E5RIL1 263 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 SCAMP3O14828 347 aaKnown RBP13.89□□□□□ -0.19
ERCC3-205ENST00000460485 PIP5K1BO14986 540 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 FFAR2O15552 330 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 KATNA1O75449 491 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 NFATC1O95644 943 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 NPPAP01160 153 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 C8GP07360 202 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 GJA1P17302 382 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 CCR3P51677 355 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 TRAP1Q12931 704 aaKnown RBP13.89□□□□□ -0.19
ERCC3-205ENST00000460485 MAD2L1Q13257 205 aaPredicted RBP13.89□□□□□ -0.19
ERCC3-205ENST00000460485 CHRNA6Q15825 494 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 RBBP7Q16576 425 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 PPP1R3AQ16821 1122 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 ACCSLQ4AC99 568 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 PLEKHS1Q5SXH7 462 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 GPRC6AQ5T6X5 926 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 TMEM198Q66K66 360 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 SBSNQ6UWP8 590 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 DPY19L3Q6ZPD9 716 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 ADGRD2Q7Z7M1 963 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 DHDDSQ86SQ9 333 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 ADIPOR2Q86V24 386 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 TMEM25Q86YD3 366 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 DDIASQ8IXT1 998 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 FAM9CQ8IZT9 166 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 GOLM1Q8NBJ4 401 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 OR6K2Q8NGY2 324 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 TRPC4APQ8TEL6 797 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 NAF1Q96HR8 494 aaKnown RBP13.89□□□□□ -0.19
ERCC3-205ENST00000460485 CDCA3Q99618 268 aaPredicted RBP13.89□□□□□ -0.19
ERCC3-205ENST00000460485 HOPXQ9BPY8 73 aaPredicted RBP13.89□□□□□ -0.19
ERCC3-205ENST00000460485 ZSCAN5AQ9BUG6 496 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 TRIM54Q9BYV2 358 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 BRD9Q9H8M2 597 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 SPAG4Q9NPE6 437 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 SDR39U1Q9NRG7 319 aaPredicted RBP13.89□□□□□ -0.19
ERCC3-205ENST00000460485 DZANK1Q9NVP4 752 aa13.89□□□□□ -0.19
ERCC3-205ENST00000460485 CACNA2D2Q9NY47 1150 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms