RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 MKS1Q9NXB0 559 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 CKLFQ9UBR5 152 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 ABHD14A-ACY1A0A1B0GW23 586 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 ZNF701M0R085 212 aaPredicted RBP9.65□□□□□ -0.86
UFD1-205ENST00000459854 MICAL2O94851 1124 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 LTFP02788 710 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 GSTT2P0CG29 244 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 CDH1P12830 882 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 MAPK8P45983 427 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 ASMTP46597 345 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 POU5F1Q01860 360 aaKnown RBP9.65□□□□□ -0.86
UFD1-205ENST00000459854 RALGDSQ12967 914 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 ZNF404Q494X3 552 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 ACOT1Q86TX2 421 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 ADGRF2Q8IZF7 708 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 POMGNT2Q8NAT1 580 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 SEMA4DQ92854 862 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 HSPBAP1Q96EW2 488 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 SMARCD1Q96GM5 515 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 TMEM169Q96HH4 297 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 ZNF512Q96ME7 567 aaPredicted RBP9.65□□□□□ -0.86
UFD1-205ENST00000459854 NFKBIZQ9BYH8 718 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 ZNF451Q9Y4E5 1061 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 CNTNAP2Q9UHC6 1331 aa9.65□□□□□ -0.86
UFD1-205ENST00000459854 DFNA5O60443 496 aa9.65□□□□□ -0.87
UFD1-205ENST00000459854 IPO13O94829 963 aaKnown RBP9.65□□□□□ -0.87
UFD1-205ENST00000459854 CATP04040 527 aaKnown RBP9.65□□□□□ -0.87
UFD1-205ENST00000459854 RLN2P04090 185 aa9.65□□□□□ -0.87
UFD1-205ENST00000459854 ZSCAN5DPP0CG00 497 aa9.65□□□□□ -0.87
UFD1-205ENST00000459854 SLC2A2P11168 524 aaPredicted RBP9.65□□□□□ -0.87
UFD1-205ENST00000459854 ANXA8P13928 327 aa9.65□□□□□ -0.87
UFD1-205ENST00000459854 ARL4DP49703 201 aa9.65□□□□□ -0.87
UFD1-205ENST00000459854 CAMK1Q14012 370 aa9.65□□□□□ -0.87
UFD1-205ENST00000459854 TEAD4Q15561 434 aa9.65□□□□□ -0.87
UFD1-205ENST00000459854 CRY1Q16526 586 aa9.65□□□□□ -0.87
UFD1-205ENST00000459854 CBWD6Q4V339 395 aa9.65□□□□□ -0.87
UFD1-205ENST00000459854 RETSATQ6NUM9 610 aa9.65□□□□□ -0.87
UFD1-205ENST00000459854 ZNF317Q96PQ6 595 aaPredicted RBP9.65□□□□□ -0.87
UFD1-205ENST00000459854 COPS4Q9BT78 406 aa9.65□□□□□ -0.87
UFD1-205ENST00000459854 POLR1EQ9GZS1 481 aaKnown RBP9.65□□□□□ -0.87
UFD1-205ENST00000459854 CPNE5Q9HCH3 593 aa9.65□□□□□ -0.87
UFD1-205ENST00000459854 KLQ9UEF7 1012 aa9.65□□□□□ -0.87
UFD1-205ENST00000459854 SLC7A8Q9UHI5 535 aa9.65□□□□□ -0.87
UFD1-205ENST00000459854 RAMP2O60895 175 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 GATBO75879 557 aaKnown RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 OR5F1O95221 314 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 RHOCP08134 193 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 LINGO3P0C6S8 592 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 NELFEP18615 380 aaKnown RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 AOC1P19801 751 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 AMPD1P23109 780 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 RHOAP61586 193 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 ZNF234Q14588 700 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 CYP4V2Q6ZWL3 525 aaPredicted RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 MARVELD2Q8N4S9 558 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 SEC14L1Q92503 715 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 C12orf43Q96C57 262 aaKnown RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 AURKBQ96GD4 344 aaPredicted RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 DNAJC1Q96KC8 554 aaKnown RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 DMRTB1Q96MA1 342 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 PANX1Q96RD7 426 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 FAM129BQ96TA1 746 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 SMAD5Q99717 465 aaKnown RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 ACO2Q99798 780 aaKnown RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 NTPCRQ9BSD7 190 aaKnown RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 ZNF696Q9H7X3 374 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 IL1RAPQ9NPH3 570 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 MAN1C1Q9NR34 630 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 TSPAN16Q9UKR8 245 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 LYVE1Q9Y5Y7 322 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 PLD2O14939 933 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 ABCB7O75027 752 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 CD36P16671 472 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 OR1G1P47890 313 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 IDH3AP50213 366 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 PGDP52209 483 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 PTPN5P54829 565 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 ELAVL2Q12926 359 aaKnown RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 ARHGAP15Q53QZ3 475 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 AHSA2Q719I0 299 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 ZNF557Q8N988 423 aaPredicted RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 INO80EQ8NBZ0 244 aaPredicted RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 SCGB3A2Q96PL1 93 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 DCSTAMPQ9H295 470 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 FBXO44Q9H4M3 255 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 SLC35C2Q9NQQ7 365 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 RASSF1Q9NS23 344 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 EGFL7Q9UHF1 273 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 CNOT11Q9UKZ1 510 aaKnown RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 MBLAC1A4D2B0 266 aaPredicted RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 CPNE3O75131 537 aaKnown RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 LYPLA1O75608 230 aaPredicted RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 UGT2B17O75795 530 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 PSKH1P11801 424 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 NOS2P35228 1153 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 TUFMP49411 452 aaKnown RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 GLT6D1Q7Z4J2 308 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 CHERPQ8IWX8 916 aaKnown RBP9.64□□□□□ -0.87
UFD1-205ENST00000459854 HSFY1Q96LI6 401 aa9.64□□□□□ -0.87
UFD1-205ENST00000459854 LENG8Q96PV6 779 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms