RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 CAPZBP47756 277 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 CACNG1Q06432 222 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 SEMA5AQ13591 1074 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 LAMB3Q13751 1172 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 SIX1Q15475 284 aaPredicted RBP15.79■□□□□ 0.12
COL7A1-203ENST00000459756 RPE65Q16518 533 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 SKIDA1Q1XH10 827 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 ZRANB3Q5FWF4 1079 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 ARHGAP40Q5TG30 622 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 CCDC81Q6ZN84 652 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 ZFAND4Q86XD8 727 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 BMPERQ8N8U9 685 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 DNAAF3Q8N9W5 541 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 OR52K1Q8NGK4 314 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 ART4Q93070 314 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 CDKN2AIPNLQ96HQ2 116 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 PDLIM2Q96JY6 352 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 KCNF1Q9H3M0 494 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 RAB6BQ9NRW1 208 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 PIH1D1Q9NWS0 290 aaKnown RBP15.79■□□□□ 0.12
COL7A1-203ENST00000459756 OCIAD1Q9NX40 245 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 ZDHHC3Q9NYG2 299 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 PSMD13Q9UNM6 376 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 DRG1Q9Y295 367 aaKnown RBP15.79■□□□□ 0.12
COL7A1-203ENST00000459756 STMND1H3BQB6 276 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 K7ENP7 123 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 FGGP02679 453 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 MTHFD1P11586 935 aaKnown RBP15.78■□□□□ 0.12
COL7A1-203ENST00000459756 ETS1P14921 441 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 ACRV1P26436 265 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 PRLHRP49683 370 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 MC2RQ01718 297 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 TGIF1Q15583 401 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 DCAF12Q5T6F0 453 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 INO80CQ6PI98 192 aaPredicted RBP15.78■□□□□ 0.12
COL7A1-203ENST00000459756 C4orf22Q6V702 233 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 PPP1R21Q6ZMI0 780 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 TAS2R42Q7RTR8 314 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 SERPINA9Q86WD7 417 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 DTX1Q86Y01 620 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 C9orf72Q96LT7 481 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 TEFMQ96QE5 360 aaKnown RBP15.78■□□□□ 0.12
COL7A1-203ENST00000459756 CCM2Q9BSQ5 444 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 RAB33BQ9H082 229 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 VPS37BQ9H9H4 285 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 KLHL3Q9UH77 587 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 B3GALT1Q9Y5Z6 326 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 ATMQ13315 3056 aa15.78■□□□□ 0.12
COL7A1-203ENST00000459756 C17orf113A0A1B0GUU1 675 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 HEATR9A2RTY3 570 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 CAPN5O15484 640 aaPredicted RBP15.77■□□□□ 0.12
COL7A1-203ENST00000459756 CEP104O60308 925 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 APRTP07741 180 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 SLC35G4P0C7Q5 338 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 CDKN1CP49918 316 aaPredicted RBP15.77■□□□□ 0.12
COL7A1-203ENST00000459756 GFERP55789 205 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 RHDQ02161 417 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 KLHL35Q6PF15 583 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 CFAP206Q8IYR0 622 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 GLIS1Q8NBF1 620 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 LSM14AQ8ND56 463 aaKnown RBP15.77■□□□□ 0.12
COL7A1-203ENST00000459756 GPR150Q8NGU9 434 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 HM13Q8TCT9 377 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 NAT14Q8WUY8 206 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 ZFPM2Q8WW38 1151 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 PMEPA1Q969W9 287 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 ZDHHC12Q96GR4 267 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 TGM7Q96PF1 710 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 RANBP9Q96S59 729 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 ZPBPQ9BS86 351 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 WWP1Q9H0M0 922 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 CASS4Q9NQ75 786 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 FBXO8Q9NRD0 319 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 HOMER3Q9NSC5 361 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 IMP3Q9NV31 184 aaKnown RBP15.77■□□□□ 0.12
COL7A1-203ENST00000459756 WDR70Q9NW82 654 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 EPHA6Q9UF33 1036 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 RIMKLBQ9ULI2 386 aa15.77■□□□□ 0.12
COL7A1-203ENST00000459756 SMG1Q96Q15 3661 aaKnown RBP15.76■□□□□ 0.11
COL7A1-203ENST00000459756 ATXN7O15265 892 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-203ENST00000459756 AP2A2O94973 939 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 GSTM1P09488 218 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 ADRA1DP25100 572 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 MSNP26038 577 aaKnown RBP15.76■□□□□ 0.11
COL7A1-203ENST00000459756 RPL22P35268 128 aaKnown RBP15.76■□□□□ 0.11
COL7A1-203ENST00000459756 ARSDP51689 593 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 GSTM4Q03013 218 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 CCDC38Q502W7 563 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 MANEAQ5SRI9 462 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 ANKS6Q68DC2 871 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 XKR5Q6UX68 686 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 CEACAM20Q6UY09 585 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 NLRP9Q7RTR0 991 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 GSTA5Q7RTV2 222 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 PRSS42Q7Z5A4 293 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 PRUNE1Q86TP1 453 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 PIANPQ8IYJ0 282 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 RSC1A1Q92681 617 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 C12orf66Q96MD2 445 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 BBC3Q96PG8 261 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms