RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 MAPK9P45984 424 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 KRT6CP48668 564 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 ALDH7A1P49419 539 aaKnown RBP8.72□□□□□ -1.01
HDAC3-202ENST00000459727 CLCN7P51798 805 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 FOXA1P55317 472 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 RPS24P62847 133 aaKnown RBP8.72□□□□□ -1.01
HDAC3-202ENST00000459727 SP3Q02447 781 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 IL18R1Q13478 541 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 CDH18Q13634 790 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 TUBA3CQ13748 450 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 GTF2H2Q13888 395 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 CAPRIN1Q14444 709 aaKnown RBP8.72□□□□□ -1.01
HDAC3-202ENST00000459727 MBTPS1Q14703 1052 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 TIGD2Q4W5G0 525 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 SETMARQ53H47 684 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-202ENST00000459727 RTP2Q5QGT7 225 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 RBM48Q5RL73 367 aaKnown RBP8.72□□□□□ -1.01
HDAC3-202ENST00000459727 MPP7Q5T2T1 576 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 TTC23Q5W5X9 447 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 CXorf57Q6NSI4 855 aaKnown RBP8.72□□□□□ -1.01
HDAC3-202ENST00000459727 KIAA1841Q6NSI8 718 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 NANOGP8Q6NSW7 305 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 GTF2H2CQ6P1K8 395 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 CYP20A1Q6UW02 462 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 IL27RAQ6UWB1 636 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 MACC1Q6ZN28 852 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 RPS27LQ71UM5 84 aaKnown RBP8.72□□□□□ -1.01
HDAC3-202ENST00000459727 GOLGA7Q7Z5G4 137 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 MILR1Q7Z6M3 343 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 ITIH5Q86UX2 942 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 CPNE9Q8IYJ1 553 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 GPR65Q8IYL9 337 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 CFAP52Q8N1V2 620 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 ZNF786Q8N393 782 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 SIDT2Q8NBJ9 832 aaKnown RBP8.72□□□□□ -1.01
HDAC3-202ENST00000459727 ITFG1Q8TB96 612 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 GPR152Q8TDT2 470 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 EEF1AKMT1Q8WVE0 214 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 SLC13A3Q8WWT9 602 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 STARD8Q92502 1023 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 ULK4Q96C45 1275 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 KCNA7Q96RP8 456 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 CGREF1Q99674 301 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 SLC39A3Q9BRY0 314 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 KLF16Q9BXK1 252 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-202ENST00000459727 RMND5AQ9H871 391 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 NANOGQ9H9S0 305 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 IL1RL2Q9HB29 575 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 LATS2Q9NRM7 1088 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 OPTCQ9UBM4 332 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 LHX3Q9UBR4 397 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 SRRDQ9UH36 339 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 EIF2B4Q9UI10 523 aaKnown RBP8.72□□□□□ -1.01
HDAC3-202ENST00000459727 CDH7Q9ULB5 785 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 OAZ3Q9UMX2 235 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 TMED5Q9Y3A6 229 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 FADS3Q9Y5Q0 445 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 AP1M2Q9Y6Q5 423 aa8.72□□□□□ -1.01
HDAC3-202ENST00000459727 TRBV5-4A0A0C4DH59 114 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 K7EPI3 171 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 GSTA4O15217 222 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 ERN1O75460 977 aaKnown RBP8.71□□□□□ -1.02
HDAC3-202ENST00000459727 RECQL5O94762 991 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-202ENST00000459727 OR6B1O95007 311 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 OR4F21O95013 312 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 PRSS23O95084 383 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 VNN2O95498 520 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 IGSF6O95976 241 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 CAPN1P07384 714 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 RETP07949 1114 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 PRPS2P11908 318 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 ETS2P15036 469 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 CKMT2P17540 419 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 GGT1P19440 569 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 SERPINA4P29622 427 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 SPAM1P38567 509 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 GNPDA1P46926 289 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 RGRP47804 291 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 HLCSP50747 726 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 ALDH3A2P51648 485 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 DIO3P55073 304 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 PRMT2P55345 433 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 ERVPABLB-1P60509 514 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 GABARAPL2P60520 117 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 UFM1P61960 85 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 ARF5P84085 180 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 BCL2L1Q07817 233 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 TRAF2Q12933 501 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 ABRQ12979 859 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 SP140Q13342 867 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 PTPRCAPQ14761 206 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 IMPG1Q17R60 797 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 DPY19L1Q2PZI1 675 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 AP5B1Q2VPB7 878 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 GGTA1PQ4G0N0 100 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 ATG9BQ674R7 924 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 GLYATQ6IB77 296 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 PSAPL1Q6NUJ1 521 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 LRRC70Q7Z2Q7 622 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 TRIM46Q7Z4K8 759 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms