RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 EPB41L1Q9H4G0 881 aa20.33■□□□□ 0.85
VARS-218ENST00000459667 THSD1Q9NS62 852 aa20.33■□□□□ 0.85
VARS-218ENST00000459667 TMEM9Q9P0T7 183 aa20.33■□□□□ 0.85
VARS-218ENST00000459667 NEU2Q9Y3R4 380 aa20.33■□□□□ 0.85
VARS-218ENST00000459667 KMT2BQ9UMN6 2715 aaPredicted RBP20.33■□□□□ 0.85
VARS-218ENST00000459667 CACNA1BQ00975 2339 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 TNFSF15O95150 251 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 JMJD7P0C870 316 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 HGFP14210 728 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 MPSTP25325 297 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 MGAT1P26572 445 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 MLLT3P42568 568 aaPredicted RBP20.32■□□□□ 0.84
VARS-218ENST00000459667 NSG1P42857 185 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 PAFAH1B1P43034 410 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 ERVPABLB-1P60509 514 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 SARNPP82979 210 aaKnown RBP20.32■□□□□ 0.84
VARS-218ENST00000459667 C16orf72Q14CZ0 275 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 TMEM71Q6P5X7 295 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 RBM12BQ8IXT5 1001 aaKnown RBP20.32■□□□□ 0.84
VARS-218ENST00000459667 CLDN19Q8N6F1 224 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 RCBTB1Q8NDN9 531 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 OR4L1Q8NH43 312 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 CPT1BQ92523 772 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 NCSTNQ92542 709 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 CAPZA3Q96KX2 299 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 DCBLD2Q96PD2 775 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 WWP1Q9H0M0 922 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 VPS37BQ9H9H4 285 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 SLC40A1Q9NP59 571 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 SYBUQ9NX95 663 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 AKAP7Q9P0M2 348 aaPredicted RBP20.32■□□□□ 0.84
VARS-218ENST00000459667 ACSL5Q9ULC5 683 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 DMXL2Q8TDJ6 3036 aa20.32■□□□□ 0.84
VARS-218ENST00000459667 PRAMEF33A0A0G2JMD5 474 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 HGSO14964 777 aaPredicted RBP20.31■□□□□ 0.84
VARS-218ENST00000459667 TMEM63AO94886 807 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 AP2A2O94973 939 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 ITGA2BP08514 1039 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 SLC35G4P0C7Q5 338 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 THRAP10827 490 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 PCBP4P57723 403 aaKnown RBP20.31■□□□□ 0.84
VARS-218ENST00000459667 TRA2AQ13595 282 aaKnown RBP eCLIP20.31■□□□□ 0.84
VARS-218ENST00000459667 GPR18Q14330 331 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 RPE65Q16518 533 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 FASTKD1Q53R41 847 aaKnown RBP20.31■□□□□ 0.84
VARS-218ENST00000459667 LYPLAL1Q5VWZ2 237 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 ANKRD22Q5VYY1 191 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 WDR74Q6RFH5 385 aaPredicted RBP20.31■□□□□ 0.84
VARS-218ENST00000459667 XKR5Q6UX68 686 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 PACS1Q6VY07 963 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 CFAP206Q8IYR0 622 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 GPR150Q8NGU9 434 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 TTC1Q99614 292 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 CCM2Q9BSQ5 444 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 DDX47Q9H0S4 455 aaKnown RBP20.31■□□□□ 0.84
VARS-218ENST00000459667 TREX1Q9NSU2 369 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 IMP3Q9NV31 184 aaKnown RBP20.31■□□□□ 0.84
VARS-218ENST00000459667 RNF14Q9UBS8 474 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 PISDQ9UG56 409 aa20.31■□□□□ 0.84
VARS-218ENST00000459667 PIKFYVEQ9Y2I7 2098 aa20.3■□□□□ 0.84
VARS-218ENST00000459667 C17orf113A0A1B0GUU1 675 aa20.3■□□□□ 0.84
VARS-218ENST00000459667 POLBP06746 335 aa20.3■□□□□ 0.84
VARS-218ENST00000459667 CASQ1P31415 396 aa20.3■□□□□ 0.84
VARS-218ENST00000459667 EIF2S3P41091 472 aaKnown RBP20.3■□□□□ 0.84
VARS-218ENST00000459667 ETF1P62495 437 aaKnown RBP20.3■□□□□ 0.84
VARS-218ENST00000459667 PPP1R7Q15435 360 aa20.3■□□□□ 0.84
VARS-218ENST00000459667 CERS6Q6ZMG9 384 aa20.3■□□□□ 0.84
VARS-218ENST00000459667 C17orf53Q8N3J3 647 aaPredicted RBP20.3■□□□□ 0.84
VARS-218ENST00000459667 LILRA3Q8N6C8 439 aaPredicted RBP20.3■□□□□ 0.84
VARS-218ENST00000459667 SGSM3Q96HU1 749 aa20.3■□□□□ 0.84
VARS-218ENST00000459667 C12orf66Q96MD2 445 aa20.3■□□□□ 0.84
VARS-218ENST00000459667 MRM3Q9HC36 420 aaKnown RBP20.3■□□□□ 0.84
VARS-218ENST00000459667 CFAP20Q9Y6A4 193 aaKnown RBP20.3■□□□□ 0.84
VARS-218ENST00000459667 PRSS21Q9Y6M0 314 aa20.3■□□□□ 0.84
VARS-218ENST00000459667 ANKRD11Q6UB99 2663 aaPredicted RBP20.3■□□□□ 0.84
VARS-218ENST00000459667 URB1O60287 2271 aaKnown RBP20.3■□□□□ 0.84
VARS-218ENST00000459667 CDRT15L2A8MXV6 281 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 QSOX1O00391 747 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 AVILO75366 819 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 UBXN7O94888 489 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 MTHFD1P11586 935 aaKnown RBP20.29■□□□□ 0.84
VARS-218ENST00000459667 TYRP1P17643 537 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 AMD1P17707 334 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 ITIH1P19827 911 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 NMBRP28336 390 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 AARS2Q5JTZ9 985 aaKnown RBP20.29■□□□□ 0.84
VARS-218ENST00000459667 CLEC14AQ86T13 490 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 CREG2Q8IUH2 290 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 SPDYE1Q8NFV5 336 aaPredicted RBP20.29■□□□□ 0.84
VARS-218ENST00000459667 TRIM44Q96DX7 344 aaPredicted RBP20.29■□□□□ 0.84
VARS-218ENST00000459667 RMDN2Q96LZ7 410 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 RUNDC3BQ96NL0 473 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 INSM2Q96T92 566 aaPredicted RBP20.29■□□□□ 0.84
VARS-218ENST00000459667 KIFC1Q9BW19 673 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 COG4Q9H9E3 785 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 CATSPERZQ9NTU4 200 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 OGFRQ9NZT2 677 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 PDP2Q9P2J9 529 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 ANAPC5Q9UJX4 755 aa20.29■□□□□ 0.84
VARS-218ENST00000459667 SOX13Q9UN79 622 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms