RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 MANSC1Q9H8J5 431 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 KCNK13Q9HB14 408 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 SLC24A3Q9HC58 644 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 OXSMQ9NWU1 459 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 UTP6Q9NYH9 597 aaKnown RBP8.59□□□□□ -1.03
RIF1-208ENST00000457745 TAS2R13Q9NYV9 303 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 WNT16Q9UBV4 365 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 MARCOQ9UEW3 520 aaPredicted RBP8.59□□□□□ -1.03
RIF1-208ENST00000457745 TRMT6Q9UJA5 497 aaKnown RBP8.59□□□□□ -1.03
RIF1-208ENST00000457745 GNPTGQ9UJJ9 305 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 CYP8B1Q9UNU6 501 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 PCDHB1Q9Y5F3 818 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 SLC5A10A0PJK1 596 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 NCF1BA6NI72 391 aaPredicted RBP8.58□□□□□ -1.04
RIF1-208ENST00000457745 NCF1CA8MVU1 366 aaPredicted RBP8.58□□□□□ -1.04
RIF1-208ENST00000457745 BTN3A1O00481 513 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 MAN2B1O00754 1011 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 ZNF195O14628 629 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 BIRC5O15392 142 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 TAPBPO15533 448 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 LATO43561 262 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 RNASEH1O60930 286 aaKnown RBP8.58□□□□□ -1.04
RIF1-208ENST00000457745 FAM107AO95990 144 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 MYL2P10916 166 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 RALBP11234 206 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 NCF1P14598 390 aaPredicted RBP8.58□□□□□ -1.04
RIF1-208ENST00000457745 CD1EP15812 388 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 NSG1P42857 185 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 BDKRB1P46663 353 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 PRLHRP49683 370 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 PRKCQQ04759 706 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 TMEM115Q12893 351 aaPredicted RBP8.58□□□□□ -1.04
RIF1-208ENST00000457745 MTAPQ13126 283 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 BOP1Q14137 746 aaKnown RBP8.58□□□□□ -1.04
RIF1-208ENST00000457745 AGERQ15109 404 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 PUS10Q3MIT2 529 aaKnown RBP8.58□□□□□ -1.04
RIF1-208ENST00000457745 CCDC153Q494R4 210 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 FBXO43Q4G163 708 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.58□□□□□ -1.04
RIF1-208ENST00000457745 TJAP1Q5JTD0 557 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 LYPLAL1Q5VWZ2 237 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 SDE2Q6IQ49 451 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 UGT3A1Q6NUS8 523 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 TMEM220Q6QAJ8 160 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 LAYNQ6UX15 382 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 GCNT7Q6ZNI0 430 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 SYT13Q7L8C5 426 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 PTGR2Q8N8N7 351 aaPredicted RBP8.58□□□□□ -1.04
RIF1-208ENST00000457745 BCAS4Q8TDM0 211 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 LRRC8CQ8TDW0 803 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 C10orf82Q8WW14 230 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 INPP5DQ92835 1189 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 ULK4Q96C45 1275 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 PHF21BQ96EK2 531 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 MSANTD3Q96H12 275 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 BMFQ96LC9 184 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 MRPL57Q9BQC6 102 aaKnown RBP8.58□□□□□ -1.04
RIF1-208ENST00000457745 TMEM79Q9BSE2 394 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 TEX101Q9BY14 249 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 SLC17A9Q9BYT1 436 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 IQCGQ9H095 443 aaKnown RBP8.58□□□□□ -1.04
RIF1-208ENST00000457745 MRPL40Q9NQ50 206 aaKnown RBP8.58□□□□□ -1.04
RIF1-208ENST00000457745 ITM2CQ9NQX7 267 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 LATS2Q9NRM7 1088 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 NCKIPSDQ9NZQ3 722 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 DLGAP2Q9P1A6 1054 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 FBXL21Q9UKT6 434 aa8.58□□□□□ -1.04
RIF1-208ENST00000457745 ABCA7Q8IZY2 2146 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 TBC1D3DA0A087WVF3 549 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 TBC1D3IA0A087WXS9 549 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 TBC1D3EA0A087X179 549 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 TBC1D3KA0A087X1G2 549 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 IGHV1OR15-9A0A0B4J2B8 117 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 PRAMEF33A0A0G2JMD5 474 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 CCDC189A1A4V9 331 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 TBC1D3FA6NER0 549 aaPredicted RBP8.57□□□□□ -1.04
RIF1-208ENST00000457745 SRRM3A6NNA2 597 aaPredicted RBP8.57□□□□□ -1.04
RIF1-208ENST00000457745 SUPT3HB4E1H0 165 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 TBC1D3LB9A6J9 549 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 E5RI56 91 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 K7ESF4 209 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 KLF11O14901 512 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 KLK8O60259 260 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 SNX3O60493 162 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 PRAMEF4O60810 478 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 KERAO60938 352 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 SUPT3HO75486 399 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 GPC4O75487 556 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 IGLV3-19P01714 112 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 SERPINE1P05121 402 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 CEACAM5P06731 702 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 TBC1D3HP0C7X1 549 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 MSH3P20585 1137 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 BCKDHBP21953 392 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 PRDX3P30048 256 aaKnown RBP8.57□□□□□ -1.04
RIF1-208ENST00000457745 TRIM23P36406 574 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 PRKAA2P54646 552 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 NAGLUP54802 743 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 CDH13P55290 713 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 HSPA14Q0VDF9 509 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms