RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 NPIPB15A6NHN6 443 aaPredicted RBP16.42■□□□□ 0.22
CCDC43-202ENST00000457422 TRIM16O95361 564 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 OTCP00480 354 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 TIMP1P01033 207 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 CAPN1P07384 714 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 ATP6V1B2P21281 511 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 TRAF3Q13114 568 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 CAPRIN1Q14444 709 aaKnown RBP16.42■□□□□ 0.22
CCDC43-202ENST00000457422 LRRC26Q2I0M4 334 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 ATP6AP1LQ52LC2 224 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 LCN8Q6JVE9 175 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 RNF165Q6ZSG1 346 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 TPRG1Q6ZUI0 275 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 ELMOD1Q8N336 334 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 ZBTB2Q8N680 514 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 METTL6Q8TCB7 284 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 UBTD2Q8WUN7 234 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 LRTOMTQ8WZ04 291 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 TRIM43Q96BQ3 446 aaPredicted RBP16.42■□□□□ 0.22
CCDC43-202ENST00000457422 SCRN2Q96FV2 425 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 CORO1BQ9BR76 489 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 C1orf50Q9BV19 199 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 SLC46A2Q9BY10 475 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 MUC13Q9H3R2 512 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 LEF1Q9UJU2 399 aaPredicted RBP16.42■□□□□ 0.22
CCDC43-202ENST00000457422 C15orf38-AP3S2A0A0A6YYH1 394 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 DYTNA2CJ06 578 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 FAM234BA2RU67 622 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 TAPBPO15533 448 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 MAP3K13O43283 966 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 SYNCRIPO60506 623 aaKnown RBP16.42■□□□□ 0.22
CCDC43-202ENST00000457422 LINC00271P0C7V0 271 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 ARL1P40616 181 aaPredicted RBP16.42■□□□□ 0.22
CCDC43-202ENST00000457422 UFM1P61960 85 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 MYLK3Q32MK0 819 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 FOXB2Q5VYV0 432 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 C22orf39Q6P5X5 142 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 CRTC1Q6UUV9 634 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 ARPINQ7Z6K5 226 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 TMEM199Q8N511 208 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 FNDC5Q8NAU1 212 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 OR4F6Q8NGB9 312 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 MCCC1Q96RQ3 725 aaPredicted RBP16.42■□□□□ 0.22
CCDC43-202ENST00000457422 CPEB1Q9BZB8 566 aaKnown RBP16.42■□□□□ 0.22
CCDC43-202ENST00000457422 RDH14Q9HBH5 336 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 ACTR3BQ9P1U1 418 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 KLHL42Q9P2K6 505 aa16.42■□□□□ 0.22
CCDC43-202ENST00000457422 CCDC154A6NI56 674 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 CCL16O15467 120 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 BNIP3LO60238 219 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 BAIAP3O94812 1187 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 CSPG5O95196 566 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 NPPAP01160 153 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 HLA-FP30511 346 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 GRIA3P42263 894 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 HTR6P50406 440 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 POLR2JP52435 117 aaKnown RBP16.41■□□□□ 0.22
CCDC43-202ENST00000457422 EMX2Q04743 252 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 FUT11Q495W5 492 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 SFRP1Q8N474 314 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 KREMEN2Q8NCW0 462 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 GPR26Q8NDV2 337 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 PROKR1Q8TCW9 393 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 SLC22A17Q8WUG5 538 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 TMEM125Q96AQ2 219 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 EME1Q96AY2 570 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 GBP5Q96PP8 586 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 YIPF3Q9GZM5 350 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 NSUN3Q9H649 340 aaKnown RBP16.41■□□□□ 0.22
CCDC43-202ENST00000457422 ASAH2Q9NR71 780 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 TLR9Q9NR96 1032 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 CCM2LQ9NUG4 571 aaPredicted RBP16.41■□□□□ 0.22
CCDC43-202ENST00000457422 ELOVL2Q9NXB9 296 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 CNOT6Q9ULM6 557 aaKnown RBP16.41■□□□□ 0.22
CCDC43-202ENST00000457422 CCL26Q9Y258 94 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 MKI67P46013 3256 aaKnown RBP16.41■□□□□ 0.22
CCDC43-202ENST00000457422 LSM1O15116 133 aaKnown RBP16.41■□□□□ 0.22
CCDC43-202ENST00000457422 CXCL14O95715 111 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 GUCA1CO95843 209 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 ADH1AP07327 375 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 CHRM1P11229 460 aaPredicted RBP16.41■□□□□ 0.22
CCDC43-202ENST00000457422 MSH3P20585 1137 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 CCR2P41597 374 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 NSG1P42857 185 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 NFYCQ13952 458 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 TTLL9Q3SXZ7 439 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 PAGE3Q5JUK9 113 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 SULT1C3Q6IMI6 304 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 IL27RAQ6UWB1 636 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 USP45Q70EL2 814 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 OTOP2Q7RTS6 562 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 ZFAND4Q86XD8 727 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 PTRH1Q86Y79 214 aaKnown RBP16.41■□□□□ 0.22
CCDC43-202ENST00000457422 VPS33AQ96AX1 596 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 ZNF597Q96LX8 424 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 APOL5Q9BWW9 433 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 CEP44Q9C0F1 390 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 SUV39H2Q9H5I1 410 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 IPPKQ9H8X2 491 aa16.41■□□□□ 0.22
CCDC43-202ENST00000457422 SUN2Q9UH99 717 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms