RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 PHF2O75151 1096 aa22.72■■□□□ 1.23
CBX3-204ENST00000456948 EIF2S3P41091 472 aaKnown RBP22.72■■□□□ 1.23
CBX3-204ENST00000456948 VPS41P49754 854 aa22.72■■□□□ 1.23
CBX3-204ENST00000456948 KRT33BQ14525 404 aa22.72■■□□□ 1.23
CBX3-204ENST00000456948 AGBL5Q8NDL9 886 aa22.72■■□□□ 1.23
CBX3-204ENST00000456948 OR4L1Q8NH43 312 aa22.72■■□□□ 1.23
CBX3-204ENST00000456948 HM13Q8TCT9 377 aa22.72■■□□□ 1.23
CBX3-204ENST00000456948 HNRNPLLQ8WVV9 542 aaKnown RBP22.72■■□□□ 1.23
CBX3-204ENST00000456948 ZFPM2Q8WW38 1151 aa22.72■■□□□ 1.23
CBX3-204ENST00000456948 SLC40A1Q9NP59 571 aa22.72■■□□□ 1.23
CBX3-204ENST00000456948 HEBP2Q9Y5Z4 205 aa22.72■■□□□ 1.23
CBX3-204ENST00000456948 COLEC10Q9Y6Z7 277 aa22.72■■□□□ 1.23
CBX3-204ENST00000456948 ZFHX4Q86UP3 3567 aa22.71■■□□□ 1.23
CBX3-204ENST00000456948 OR52A4PA6NMU1 304 aa22.71■■□□□ 1.23
CBX3-204ENST00000456948 UBXN7O94888 489 aa22.71■■□□□ 1.23
CBX3-204ENST00000456948 BRAFP15056 766 aa22.71■■□□□ 1.23
CBX3-204ENST00000456948 CLCA4Q14CN2 919 aa22.71■■□□□ 1.23
CBX3-204ENST00000456948 JAMLQ86YT9 394 aa22.71■■□□□ 1.23
CBX3-204ENST00000456948 SGSM3Q96HU1 749 aa22.71■■□□□ 1.23
CBX3-204ENST00000456948 CCDC74BQ96LY2 380 aa22.71■■□□□ 1.23
CBX3-204ENST00000456948 TSSK1BQ9BXA7 367 aa22.71■■□□□ 1.23
CBX3-204ENST00000456948 ASCL3Q9NQ33 180 aa22.71■■□□□ 1.23
CBX3-204ENST00000456948 PISDQ9UG56 409 aa22.71■■□□□ 1.23
CBX3-204ENST00000456948 PSMD13Q9UNM6 376 aa22.71■■□□□ 1.23
CBX3-204ENST00000456948 PCDHGA7Q9Y5G6 932 aa22.71■■□□□ 1.23
CBX3-204ENST00000456948 CTAGE9A4FU28 777 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 IFRD1O00458 451 aaPredicted RBP22.7■■□□□ 1.22
CBX3-204ENST00000456948 PFDN6O15212 129 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 FTH1P02794 183 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 OR56A5P0C7T3 313 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 THRAP10827 490 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 HOXB3P14651 431 aaPredicted RBP22.7■■□□□ 1.22
CBX3-204ENST00000456948 NDUFS1P28331 727 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 CDKN1CP49918 316 aaPredicted RBP22.7■■□□□ 1.22
CBX3-204ENST00000456948 ARSDP51689 593 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 ACVR1Q04771 509 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 PPP1R7Q15435 360 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 RPE65Q16518 533 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 BROXQ5VW32 411 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 ZNF574Q6ZN55 896 aaPredicted RBP22.7■■□□□ 1.22
CBX3-204ENST00000456948 OR13J1Q8NGT2 312 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 NAPGQ99747 312 aaPredicted RBP22.7■■□□□ 1.22
CBX3-204ENST00000456948 TBC1D10AQ9BXI6 508 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 DPH1Q9BZG8 443 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 B3GNT4Q9C0J1 378 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.7■■□□□ 1.22
CBX3-204ENST00000456948 FAM8A1Q9UBU6 413 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 WDR37Q9Y2I8 494 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 SAR1BQ9Y6B6 198 aa22.7■■□□□ 1.22
CBX3-204ENST00000456948 ADAMTS20P59510 1910 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 COL27A1Q8IZC6 1860 aaPredicted RBP22.69■■□□□ 1.22
CBX3-204ENST00000456948 MAGEB16A2A368 324 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 CDRT15L2A8MXV6 281 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 TLX3O43711 291 aaPredicted RBP22.69■■□□□ 1.22
CBX3-204ENST00000456948 GOT2P00505 430 aaKnown RBP22.69■■□□□ 1.22
CBX3-204ENST00000456948 POLBP06746 335 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 PAFAH1B1P43034 410 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 PLOD1Q02809 727 aaPredicted RBP22.69■■□□□ 1.22
CBX3-204ENST00000456948 RPA4Q13156 261 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 DBN1Q16643 649 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 TTC27Q6P3X3 843 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 PACS1Q6VY07 963 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 FAM83HQ6ZRV2 1179 aaPredicted RBP22.69■■□□□ 1.22
CBX3-204ENST00000456948 TMPRSS9Q7Z410 1059 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 CLEC14AQ86T13 490 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 PIANPQ8IYJ0 282 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 KCNE4Q8WWG9 221 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 PRR11Q96HE9 360 aaPredicted RBP22.69■■□□□ 1.22
CBX3-204ENST00000456948 C12orf66Q96MD2 445 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 RUNDC3BQ96NL0 473 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 WWP1Q9H0M0 922 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 MRM3Q9HC36 420 aaKnown RBP22.69■■□□□ 1.22
CBX3-204ENST00000456948 XAB2Q9HCS7 855 aaKnown RBP22.69■■□□□ 1.22
CBX3-204ENST00000456948 CHRAC1Q9NRG0 131 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 IMP3Q9NV31 184 aaKnown RBP22.69■■□□□ 1.22
CBX3-204ENST00000456948 SAMD15Q9P1V8 674 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 PDP2Q9P2J9 529 aa22.69■■□□□ 1.22
CBX3-204ENST00000456948 DSPP15924 2871 aaKnown RBP22.68■■□□□ 1.22
CBX3-204ENST00000456948 PKD1L2Q7Z442 2459 aa22.68■■□□□ 1.22
CBX3-204ENST00000456948 USP27XA6NNY8 438 aa22.68■■□□□ 1.22
CBX3-204ENST00000456948 NVLO15381 856 aaKnown RBP22.68■■□□□ 1.22
CBX3-204ENST00000456948 MTHFD1P11586 935 aaKnown RBP22.68■■□□□ 1.22
CBX3-204ENST00000456948 PAMP19021 973 aa22.68■■□□□ 1.22
CBX3-204ENST00000456948 FOXN2P32314 431 aa22.68■■□□□ 1.22
CBX3-204ENST00000456948 MAGEA6P43360 314 aa22.68■■□□□ 1.22
CBX3-204ENST00000456948 ABCG1P45844 678 aa22.68■■□□□ 1.22
CBX3-204ENST00000456948 TTPAP49638 278 aa22.68■■□□□ 1.22
CBX3-204ENST00000456948 MAPK10P53779 464 aa22.68■■□□□ 1.22
CBX3-204ENST00000456948 GPR18Q14330 331 aa22.68■■□□□ 1.22
CBX3-204ENST00000456948 PLCL1Q15111 1095 aa22.68■■□□□ 1.22
CBX3-204ENST00000456948 COL28A1Q2UY09 1125 aa22.68■■□□□ 1.22
CBX3-204ENST00000456948 SNAP47Q5SQN1 464 aa22.68■■□□□ 1.22
CBX3-204ENST00000456948 RCBTB1Q8NDN9 531 aa22.68■■□□□ 1.22
CBX3-204ENST00000456948 ZDHHC12Q96GR4 267 aa22.68■■□□□ 1.22
CBX3-204ENST00000456948 CATSPERZQ9NTU4 200 aa22.68■■□□□ 1.22
CBX3-204ENST00000456948 RNF14Q9UBS8 474 aa22.68■■□□□ 1.22
CBX3-204ENST00000456948 SLC2A6Q9UGQ3 507 aa22.68■■□□□ 1.22
CBX3-204ENST00000456948 CHD6Q8TD26 2715 aa22.67■■□□□ 1.22
CBX3-204ENST00000456948 A0A1W2PNU3 283 aaPredicted RBP22.67■■□□□ 1.22
CBX3-204ENST00000456948 ZNF185O15231 689 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms