RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 IGF2-ASQ6U949 168 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 PLXDC1Q8IUK5 500 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 OR4L1Q8NH43 312 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 SNIP1Q8TAD8 396 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 LINC00615Q96LM1 132 aaPredicted RBP17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 WWP1Q9H0M0 922 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 UCK1Q9HA47 277 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 CHRAC1Q9NRG0 131 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 IMP3Q9NV31 184 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 SLC2A6Q9UGQ3 507 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 KLHL3Q9UH77 587 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 COL27A1Q8IZC6 1860 aaPredicted RBP17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 KIF26BQ2KJY2 2108 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 C17orf113A0A1B0GUU1 675 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 A0A1W2PNU3 283 aaPredicted RBP17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 PMS2P1A4D2B8 440 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 LILRA5A6NI73 299 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 PRR19A6NJB7 356 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 QSOX1O00391 747 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 HGSO14964 777 aaPredicted RBP17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 UBXN7O94888 489 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 AP2A2O94973 939 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 MGAT1P26572 445 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 CRADDP78560 199 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 ITIH4Q14624 930 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 PLCL1Q15111 1095 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 DBN1Q16643 649 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 CYP1B1Q16678 543 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 KCTD19Q17RG1 926 aaPredicted RBP17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 CERS6Q6ZMG9 384 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 PIANPQ8IYJ0 282 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 CLDN19Q8N6F1 224 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 OTUD6BQ8N6M0 293 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 AGBL5Q8NDL9 886 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 OR13J1Q8NGT2 312 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 HM13Q8TCT9 377 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 PEX13Q92968 403 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 CCDC97Q96F63 343 aaPredicted RBP17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 PRR11Q96HE9 360 aaPredicted RBP17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 CAPZA3Q96KX2 299 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 C12orf66Q96MD2 445 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 ZNF778Q96MU6 729 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 NAPGQ99747 312 aaPredicted RBP17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 SLC40A1Q9NP59 571 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 ASCL3Q9NQ33 180 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 CFAP20Q9Y6A4 193 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 COLEC10Q9Y6Z7 277 aa17.71■□□□□ 0.43
PDLIM2-215ENST00000456545 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 IGLV3-16A0A075B6K0 115 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 CTAGE9A4FU28 777 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 IFRD1O00458 451 aaPredicted RBP17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 OR56A5P0C7T3 313 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 ITIH1P19827 911 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 PSMA3P25788 255 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 FOXN2P32314 431 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 CSF2RBP32927 897 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 FNTAP49354 379 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 CFHR1Q03591 330 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 GPR18Q14330 331 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 C16orf72Q14CZ0 275 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 AARS2Q5JTZ9 985 aaKnown RBP17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 CASC4Q6P4E1 433 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 KLHL35Q6PF15 583 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 MICALCLQ6ZW33 695 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 KCNE4Q8WWG9 221 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 TMEM9Q9P0T7 183 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 SAMD15Q9P1V8 674 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 HEBP2Q9Y5Z4 205 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 SAR1BQ9Y6B6 198 aa17.7■□□□□ 0.42
PDLIM2-215ENST00000456545 URB1O60287 2271 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 A0A087WV48 116 aa17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 PRAMEF33A0A0G2JMD5 474 aa17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 TCRBV7S3A2A0A539 114 aa17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 SGTAO43765 313 aa17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 FTH1P02794 183 aa17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 GSTM1P09488 218 aa17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 THRAP10827 490 aa17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 MTHFD1P11586 935 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 SLC5A2P31639 672 aa17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 PAFAH1B1P43034 410 aa17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 ABCG1P45844 678 aa17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 GSTM4Q03013 218 aa17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 BROXQ5VW32 411 aa17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 FAM129CQ86XR2 697 aa17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 USP7Q93009 1102 aa17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 TGM7Q96PF1 710 aa17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 INSM2Q96T92 566 aaPredicted RBP17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 CATSPERZQ9NTU4 200 aa17.69■□□□□ 0.42
PDLIM2-215ENST00000456545 CDRT15L2A8MXV6 281 aa17.68■□□□□ 0.42
PDLIM2-215ENST00000456545 CD3EAPO15446 510 aaKnown RBP17.68■□□□□ 0.42
PDLIM2-215ENST00000456545 ACVR1Q04771 509 aa17.68■□□□□ 0.42
PDLIM2-215ENST00000456545 KCNJ11Q14654 390 aa17.68■□□□□ 0.42
PDLIM2-215ENST00000456545 ELMO1Q92556 727 aa17.68■□□□□ 0.42
PDLIM2-215ENST00000456545 ZDHHC12Q96GR4 267 aa17.68■□□□□ 0.42
PDLIM2-215ENST00000456545 FERD3LQ96RJ6 166 aa17.68■□□□□ 0.42
PDLIM2-215ENST00000456545 TSSK1BQ9BXA7 367 aa17.68■□□□□ 0.42
PDLIM2-215ENST00000456545 COG4Q9H9E3 785 aa17.68■□□□□ 0.42
PDLIM2-215ENST00000456545 SYBUQ9NX95 663 aa17.68■□□□□ 0.42
PDLIM2-215ENST00000456545 ASIC3Q9UHC3 531 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms