RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 SSX4O60224 188 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 PRKD3O94806 890 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 LCKP06239 509 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 ZNF286BP0CG31 522 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 GRK3P35626 688 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 DCTP40126 519 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 TRPC1P48995 793 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 SLC26A2P50443 739 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 ST13P50502 369 aaKnown RBP10.18□□□□□ -0.78
CLIP4-208ENST00000456385 SLC35A2P78381 396 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 IL1RL1Q01638 556 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 IHHQ14623 411 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 ATP6AP1LQ52LC2 224 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 SYT6Q5T7P8 510 aaPredicted RBP10.18□□□□□ -0.78
CLIP4-208ENST00000456385 PM20D1Q6GTS8 502 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 CES5AQ6NT32 575 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 CCBE1Q6UXH8 406 aaPredicted RBP10.18□□□□□ -0.78
CLIP4-208ENST00000456385 NECAB2Q7Z6G3 386 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 HEATR4Q86WZ0 1026 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 DCP2Q8IU60 420 aaKnown RBP10.18□□□□□ -0.78
CLIP4-208ENST00000456385 CCDC117Q8IWD4 279 aaPredicted RBP10.18□□□□□ -0.78
CLIP4-208ENST00000456385 SVOPQ8N4V2 548 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 LINC01465Q8N7H1 131 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 OR10A6Q8NH74 314 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 KCTD13Q8WZ19 329 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 ELMO1Q92556 727 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 ZHX1-C8orf76Q96EF9 292 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 ZNF599Q96NL3 588 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 CDK5RAP1Q96SZ6 601 aaKnown RBP10.18□□□□□ -0.78
CLIP4-208ENST00000456385 TBCDQ9BTW9 1192 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 IKZF5Q9H5V7 419 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 ACTR8Q9H981 624 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 USE1Q9NZ43 259 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 VAPAQ9P0L0 249 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 OPTCQ9UBM4 332 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 CACNG4Q9UBN1 327 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 NEU3Q9UQ49 428 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 FAM234BA2RU67 622 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 EFCAB9A8MZ26 197 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 TNFRSF10AO00220 468 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 IDH3BO43837 385 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 DFNA5O60443 496 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 CYP11A1P05108 521 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 PRSS56P0CW18 603 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 CD36P16671 472 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 ZNF37AP17032 561 aaPredicted RBP10.17□□□□□ -0.78
CLIP4-208ENST00000456385 EPS8Q12929 822 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 PRKG2Q13237 762 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 E2F2Q14209 437 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 SYT16Q17RD7 645 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 ZNF484Q5JVG2 852 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 C6orf136Q5SQH8 315 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 TMC5Q6UXY8 1006 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 LBX2Q6XYB7 198 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 DET1Q7L5Y6 550 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 ZFAND4Q86XD8 727 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 FAM126BQ8IXS8 530 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 NIM1KQ8IY84 436 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 SYTL1Q8IYJ3 562 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 NLGN4XQ8N0W4 816 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 METTL4Q8N3J2 472 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 PPP1R13LQ8WUF5 828 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 UBE2FQ969M7 185 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 RHBDF1Q96CC6 855 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 CDK15Q96Q40 435 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 TMEM209Q96SK2 561 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 YME1L1Q96TA2 773 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 BARD1Q99728 777 aaKnown RBP10.17□□□□□ -0.78
CLIP4-208ENST00000456385 BCL7BQ9BQE9 202 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 UGT2B28Q9BY64 529 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 RNF39Q9H2S5 420 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 QPCTLQ9NXS2 382 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 BOLA1Q9Y3E2 137 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 UGT2A1Q9Y4X1 527 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 N6AMT1Q9Y5N5 214 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 FNDC1Q4ZHG4 1894 aaPredicted RBP10.17□□□□□ -0.78
CLIP4-208ENST00000456385 SMIM28A0A1B0GU29 152 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 ISPDA4D126 451 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 PABPN1LA6NDY0 278 aaKnown RBP10.17□□□□□ -0.78
CLIP4-208ENST00000456385 AGAP5A6NIR3 686 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 M0QX08 132 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 TNPO2O14787 897 aaKnown RBP10.17□□□□□ -0.78
CLIP4-208ENST00000456385 GSTA4O15217 222 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 VPS4BO75351 444 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 MFN2O95140 757 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 FDXRP22570 491 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 RYKP34925 604 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 TGFBR2P37173 567 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 SLC26A3P40879 764 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 SERPINH1P50454 418 aaKnown RBP10.17□□□□□ -0.78
CLIP4-208ENST00000456385 ERVK-8P63133 956 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 ITKQ08881 620 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 GBX1Q14549 363 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 SEMA3AQ14563 771 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 XKR7Q5GH72 579 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 WSCD1Q658N2 575 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 DCAF15Q66K64 600 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 ALKAL1Q6UXT8 129 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 ARMCX2Q7L311 632 aa10.17□□□□□ -0.78
CLIP4-208ENST00000456385 GDPD3Q7L5L3 318 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms