RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 CHIAQ9BZP6 476 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 TBC1D17Q9HA65 648 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 IFT80Q9P2H3 777 aaPredicted RBP7.66□□□□□ -1.18
RIF1-206ENST00000453091 COQ4Q9Y3A0 265 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 UGT2B11O75310 529 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 TCEA1P23193 301 aaKnown RBP7.66□□□□□ -1.18
RIF1-206ENST00000453091 PRDX6P30041 224 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 RPL4P36578 427 aaKnown RBP7.66□□□□□ -1.18
RIF1-206ENST00000453091 SIX1Q15475 284 aaPredicted RBP7.66□□□□□ -1.18
RIF1-206ENST00000453091 DUSP28Q4G0W2 176 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 FKBP1CQ5VVH2 108 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 TXNDC11Q6PKC3 985 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 SERPINA9Q86WD7 417 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 TRIM63Q969Q1 353 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 FERD3LQ96RJ6 166 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 NIFKQ9BYG3 293 aaKnown RBP7.66□□□□□ -1.18
RIF1-206ENST00000453091 ZNF214Q9UL59 606 aaPredicted RBP7.66□□□□□ -1.18
RIF1-206ENST00000453091 SSR3Q9UNL2 185 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 A0A088AWK7 358 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 XPNPEP2O43895 674 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 RNASEH2AO75792 299 aaKnown RBP7.66□□□□□ -1.18
RIF1-206ENST00000453091 DLDP09622 509 aaKnown RBP7.66□□□□□ -1.18
RIF1-206ENST00000453091 PRG2P13727 222 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 NTSP30990 170 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 HSPB3Q12988 150 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 LCP2Q13094 533 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 GET4Q7L5D6 327 aaPredicted RBP7.66□□□□□ -1.18
RIF1-206ENST00000453091 PARGQ86W56 976 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 MTIF3Q9H2K0 278 aaKnown RBP7.66□□□□□ -1.18
RIF1-206ENST00000453091 SP140LQ9H930 580 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 ZSCAN32Q9NX65 697 aa7.66□□□□□ -1.18
RIF1-206ENST00000453091 SEPT4O43236 478 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 HOXA2O43364 376 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 AGTR2P50052 363 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 VBP1P61758 197 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 TIGD5Q53EQ6 642 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 INTS6LQ5JSJ4 861 aaKnown RBP7.65□□□□□ -1.18
RIF1-206ENST00000453091 C1orf220Q5T0J3 134 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 OR4F3Q6IEY1 312 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 EPGNQ6UW88 154 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 RAVER1Q8IY67 606 aaKnown RBP7.65□□□□□ -1.18
RIF1-206ENST00000453091 PPTC7Q8NI37 304 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 WRAP53Q9BUR4 548 aaKnown RBP7.65□□□□□ -1.18
RIF1-206ENST00000453091 MRIQ9BWK5 157 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 COMMD3Q9UBI1 195 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 NRP1O14786 923 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 MATN3O15232 486 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 KHDRBS3O75525 346 aaKnown RBP7.65□□□□□ -1.18
RIF1-206ENST00000453091 CYP3A5P20815 502 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 CCNCP24863 283 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 GKP32189 559 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 C2orf80Q0P641 193 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 CEACAM7Q14002 265 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 ACAP2Q15057 778 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 CPTPQ5TA50 214 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 CDC73Q6P1J9 531 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 ITIH5Q86UX2 942 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 CAND1Q86VP6 1230 aaKnown RBP7.65□□□□□ -1.18
RIF1-206ENST00000453091 MAGEE1Q9HCI5 957 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 AHSPQ9NZD4 102 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 FBXW11Q9UKB1 542 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 PTCH2Q9Y6C5 1203 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 SGTAO43765 313 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 PRAMEF1O95521 474 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 FGF1P05230 155 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 CYP2A6P11509 494 aaPredicted RBP7.65□□□□□ -1.18
RIF1-206ENST00000453091 CCND3P30281 292 aaPredicted RBP7.65□□□□□ -1.18
RIF1-206ENST00000453091 MMP14P50281 582 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 NKX2-5P52952 324 aaPredicted RBP7.65□□□□□ -1.18
RIF1-206ENST00000453091 SLC18A2Q05940 514 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 NPTX1Q15818 432 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 PGBD2Q6P3X8 592 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 MZT2AQ6P582 158 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 CLEC20AQ6ZU45 233 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 STK40Q8N2I9 435 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 BRI3BPQ8WY22 251 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 SMG9Q9H0W8 520 aaKnown RBP7.65□□□□□ -1.18
RIF1-206ENST00000453091 ST6GALNAC4Q9H4F1 302 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 ZNF224Q9NZL3 707 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 GSTK1Q9Y2Q3 226 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 OAS3Q9Y6K5 1087 aaKnown RBP7.65□□□□□ -1.18
RIF1-206ENST00000453091 ECI2O75521 394 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 ANXA4P09525 319 aaPredicted RBP7.65□□□□□ -1.18
RIF1-206ENST00000453091 ANXA11P50995 505 aaKnown RBP7.65□□□□□ -1.18
RIF1-206ENST00000453091 SLC10A2Q12908 348 aaPredicted RBP7.65□□□□□ -1.18
RIF1-206ENST00000453091 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.65□□□□□ -1.18
RIF1-206ENST00000453091 ADAMTSL2Q86TH1 951 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 LRRC52Q8N7C0 313 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 HJURPQ8NCD3 748 aaPredicted RBP7.65□□□□□ -1.18
RIF1-206ENST00000453091 WDR12Q9GZL7 423 aaKnown RBP7.65□□□□□ -1.18
RIF1-206ENST00000453091 TIMMDC1Q9NPL8 285 aa7.65□□□□□ -1.18
RIF1-206ENST00000453091 OR6A2O95222 327 aa7.65□□□□□ -1.19
RIF1-206ENST00000453091 GNAZP19086 355 aa7.65□□□□□ -1.19
RIF1-206ENST00000453091 CHIT1Q13231 466 aa7.65□□□□□ -1.19
RIF1-206ENST00000453091 MOGSQ13724 837 aa7.65□□□□□ -1.19
RIF1-206ENST00000453091 GK3PQ14409 553 aa7.65□□□□□ -1.19
RIF1-206ENST00000453091 FAM98AQ8NCA5 519 aaKnown RBP7.65□□□□□ -1.19
RIF1-206ENST00000453091 OR8H1Q8NGG4 311 aa7.65□□□□□ -1.19
RIF1-206ENST00000453091 CNIH3Q8TBE1 160 aa7.65□□□□□ -1.19
RIF1-206ENST00000453091 BORCS6Q96GS4 357 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms