RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ERICH2A1L162 156 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC15A5A6NIM6 579 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 NPIPB5A8MRT5 1133 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 E9PLN8 166 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 H3BQ06 376 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 AGPSO00116 658 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 LGALS8O00214 317 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 TRIM24O15164 1050 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 CCNT1O60563 726 aaKnown RBP4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 NIPSNAP2O75323 286 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 ECI2O75521 394 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 PDE9AO76083 593 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 WDR47O94967 919 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 CXCL14O95715 111 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 GNA14O95837 355 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 CHRNA1P02708 482 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 UGT2B4P06133 528 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 CYP3A4P08684 503 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 ERVK-10P10266 1014 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 ODC1P11926 461 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 TACR2P21452 398 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 DRD5P21918 477 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 U2AF2P26368 475 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 PTPN9P43378 593 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 SYKP43405 635 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 PXNP49023 591 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 MTHFSP49914 203 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 CLCN3P51790 818 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 CLCN4P51793 760 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 HNRNPFP52597 415 aaKnown RBP4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 PRMT2P55345 433 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 PTENP60484 403 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 ECT2LQ008S8 904 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 TLE3Q04726 772 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 PDE7AQ13946 482 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 IL18Q14116 193 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 FGFBP1Q14512 234 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 PTPRCAPQ14761 206 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 ACOX1Q15067 660 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 PTPAQ15257 358 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 DECR1Q16698 335 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 COL28A1Q2UY09 1125 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 BCL7AQ4VC05 210 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 GPAT3Q53EU6 434 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 C10orf120Q5SQS8 335 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 VASNQ6EMK4 673 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 DHRS7BQ6IAN0 325 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC27A1Q6PCB7 646 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 GJB7Q6PEY0 223 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 TEPPQ6URK8 271 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 DET1Q7L5Y6 550 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 OTOP2Q7RTS6 562 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 PIGWQ7Z7B1 504 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 BIVMQ86UB2 503 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 GPAT4Q86UL3 456 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 ERO1BQ86YB8 467 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 EFCAB13Q8IY85 973 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 CENPLQ8N0S6 344 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 GHDCQ8N2G8 530 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 TTLL6Q8N841 843 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 KYQ8NBH2 561 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 OR56B1Q8NGI3 324 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 GPT2Q8TD30 523 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC20A1Q8WUM9 679 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 RLN3Q8WXF3 142 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 ANKRD7Q92527 254 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 APBB2Q92870 758 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC41A2Q96JW4 573 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 PANX3Q96QZ0 392 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 LMF1Q96S06 567 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 NEU1Q99519 415 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 VKORC1Q9BQB6 163 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 LLPHQ9BRT6 129 aaKnown RBP4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 ABHD6Q9BV23 337 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 TRIM62Q9BVG3 475 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 PINK1Q9BXM7 581 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 MRPL37Q9BZE1 423 aaKnown RBP4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 ATG10Q9H0Y0 220 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 GSTO2Q9H4Y5 243 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 SPACA1Q9HBV2 294 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 EPB41L5Q9HCM4 733 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 PNPLA3Q9NST1 481 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 ING3Q9NXR8 418 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 OR6C2Q9NZP2 312 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 WBP11Q9Y2W2 641 aaKnown RBP4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 AAR2Q9Y312 384 aaKnown RBP4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 PHLPP2Q6ZVD8 1323 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 NCAPD2Q15021 1401 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 A0A1W2PN81 502 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 A0A1W2PR77 199 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 HELTA6NFD8 242 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 CGB1A6NKQ9 187 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 MEI4A8MW99 385 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 ADM5C9JUS6 153 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 IFNL4K9M1U5 179 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 M0QZQ0 153 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 MAGEB2O15479 319 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 AKAP8O43823 692 aaKnown RBP4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 TRIM3O75382 744 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms