RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 STX12Q86Y82 276 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 PLCZ1Q86YW0 608 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 GLB1L2Q8IW92 636 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 CCDC60Q8IWA6 550 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 RHOT1Q8IXI2 618 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 CPNE9Q8IYJ1 553 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 ANKRD35Q8N283 1001 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 METTL13Q8N6R0 699 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 TTLL6Q8N841 843 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 SNX31Q8N9S9 440 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 LEMD2Q8NC56 503 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 TMIEQ8NEW7 156 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 OR4M1Q8NGD0 313 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 OR5AN1Q8NGI8 311 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 OR8K3Q8NH51 312 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 VANGL1Q8TAA9 524 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 SLC30A5Q8TAD4 765 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 LRRC20Q8TCA0 184 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 IFI44Q8TCB0 444 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZFAND1Q8TCF1 268 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 FBXO25Q8TCJ0 367 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 PHF10Q8WUB8 498 aaKnown RBP3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 RAB2BQ8WUD1 216 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 GTF3AQ92664 365 aaKnown RBP3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 MYDGFQ969H8 173 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 NCLNQ969V3 563 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 LRRC59Q96AG4 307 aaKnown RBP3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 FKBP10Q96AY3 582 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 TESCQ96BS2 214 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 ERLEC1Q96DZ1 483 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 WBP1Q96G27 269 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 TMEM41AQ96HV5 264 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 CLPTM1LQ96KA5 538 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 MSLNLQ96KJ4 702 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 HSFY1Q96LI6 401 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 TBATAQ96M53 351 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 FAM227BQ96M60 508 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 KLHL15Q96M94 604 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZNF512Q96ME7 567 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 PSMB7Q99436 277 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 SERPINI1Q99574 410 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 PYM1Q9BRP8 204 aaKnown RBP3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 TMEM246Q9BRR3 403 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 NTPCRQ9BSD7 190 aaKnown RBP3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZSCAN5AQ9BUG6 496 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 BDH2Q9BUT1 245 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 TTLL2Q9BWV7 592 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 OSBPL11Q9BXB4 747 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 SLC6A15Q9H2J7 730 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 LDAHQ9H6V9 325 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 MVB12BQ9H7P6 319 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 CXorf21Q9HAI6 301 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 MBNL3Q9NUK0 354 aaKnown RBP3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 TDP1Q9NUW8 608 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 PNPOQ9NVS9 261 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 PAK1IP1Q9NWT1 392 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 NKIRAS1Q9NYS0 192 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 EPHA6Q9UF33 1036 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 CYB5R1Q9UHQ9 305 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 IPO11Q9UI26 975 aaKnown RBP3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 GLS2Q9UI32 602 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 STOML2Q9UJZ1 356 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 DBR1Q9UK59 544 aaKnown RBP3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 PSME2Q9UL46 239 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 CLEC4AQ9UMR7 237 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZFR2Q9UPR6 939 aaKnown RBP3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 ENTPD4Q9Y227 616 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 MAN2B2Q9Y2E5 1009 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 RPH3AQ9Y2J0 694 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 TMX2Q9Y320 296 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 GRIP1Q9Y3R0 1128 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 TCAF1Q9Y4C2 921 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 PCDHGB2Q9Y5G2 931 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 SNX5Q9Y5X3 404 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 HCFC2Q9Y5Z7 792 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 KCNE2Q9Y6J6 123 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 HSPE1-MOB4S4R3N1 261 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 NCANO14594 1321 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 CNTNAP1P78357 1384 aa3.59□□□□□ -1.83
HMGB3P8-201ENST00000449709 DIP2BQ9P265 1576 aa3.59□□□□□ -1.84
HMGB3P8-201ENST00000449709 TOGARAM1Q9Y4F4 1720 aa3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 OTOFQ9HC10 1997 aa3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 A0A1W2PPL8 197 aa3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 A0A1W2PR48 441 aa3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 SAGE2PA6NJ88 616 aa3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 HACD1B0YJ81 288 aa3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 H0Y626 953 aa3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 GOLGA8SH3BPF8 625 aa3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 K7ENM7 598 aa3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 M0R3H8 397 aa3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 FCHO1O14526 889 aa3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 POLR2DO15514 142 aaKnown RBP3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 KCNN4O15554 427 aa3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 SPOPO43791 374 aa3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 EIF1BO60739 113 aaKnown RBP3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 NDUFS6O75380 124 aaKnown RBP3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 ENDOD1O94919 500 aa3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 GGPS1O95749 300 aa3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 TTC4O95801 387 aa3.58□□□□□ -1.84
HMGB3P8-201ENST00000449709 BAG2O95816 211 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms