RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 BMP1P13497 986 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 SNTA1Q13424 505 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 CXCL17Q6UXB2 119 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 C3orf58Q8NDZ4 430 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 KLHDC9Q8NEP7 349 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 HDAC2Q92769 488 aaKnown RBP13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 RNF34Q969K3 372 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 FERD3LQ96RJ6 166 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 DUSP16Q9BY84 665 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 CHST12Q9NRB3 414 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 CHRAC1Q9NRG0 131 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 FAM105AQ9NUU6 356 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 CCDC167Q9P0B6 97 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 HCN4Q9Y3Q4 1203 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 VPS4BO75351 444 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 OR7A10O76100 309 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 PRKD3O94806 890 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 LTFP02788 710 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 YES1P07947 543 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 ALOX12P18054 663 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 ESCO2Q56NI9 601 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 SLC22A15Q8IZD6 547 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 PLD6Q8N2A8 252 aaKnown RBP13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 ELMO2Q96JJ3 720 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 C1QTNF7Q9BXJ2 289 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 TIGARQ9NQ88 270 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 EGFL7Q9UHF1 273 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 ZDHHC2Q9UIJ5 367 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 AP3M1Q9Y2T2 418 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 PSAT1Q9Y617 370 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 HTR1AP08908 422 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 ICAM2P13598 275 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 UQCRC1P31930 480 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 DDOSTP39656 456 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 OTUD3Q5T2D3 398 aaPredicted RBP13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 THAP5Q7Z6K1 395 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 SYTL1Q8IYJ3 562 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 DACT3Q96B18 629 aaPredicted RBP13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 TM9SF2Q99805 663 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 SARDHQ9UL12 918 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 MN1Q10571 1320 aaPredicted RBP13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 CCDC78A2IDD5 438 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 KRT87PA6NCN2 255 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 ZNF99A8MXY4 864 aaPredicted RBP13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 PLK4O00444 970 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 CRCPO75575 148 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 MLLT3P42568 568 aaPredicted RBP13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 KIF19Q2TAC6 998 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 GNASQ5JWF2 1037 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 FAM45BPQ6NSW5 357 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 CD300LGQ6UXG3 332 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 LRRC20Q8TCA0 184 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 FAM45AQ8TCE6 357 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 SLIRPQ9GZT3 109 aaKnown RBP13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 CCSER2Q9H7U1 834 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 AGO3Q9H9G7 860 aaKnown RBP13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 ACOXLQ9NUZ1 547 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 CACNG4Q9UBN1 327 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 FBXO5Q9UKT4 447 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 PDE10AQ9Y233 779 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 PTGES3LE9PB15 166 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 DNAJB5O75953 348 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 PGK1P00558 417 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 OXTRP30559 389 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 TPD52P55327 224 aaPredicted RBP13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 DEFA1P59665 94 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 DEFA3P59666 94 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 UBQLNLQ8IYU4 475 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 SLC22A17Q8WUG5 538 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 CRTAC1Q9NQ79 661 aa13.3□□□□□ -0.28
SYNGAP1-204ENST00000449372 SYNJ2BP-COX16A0A087WUM0 186 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 FAM95CA0A1B0GW59 222 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 NRP2O60462 931 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 CPNE3O75131 537 aaKnown RBP13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 PTPN3P26045 913 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 TKTL1P51854 596 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 NCS1P62166 190 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 SREBF2Q12772 1141 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 NDUFAF5Q5TEU4 345 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 CES3Q6UWW8 571 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 CLEC20AQ6ZU45 233 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 TRPV3Q8NET8 790 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 BCL7BQ9BQE9 202 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 ENTPD7Q9NQZ7 604 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 TMEM30AQ9NV96 361 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 COX16Q9P0S2 106 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 XPR1Q9UBH6 696 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 PNMA8BQ9ULN7 279 aaPredicted RBP13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 SEPT4O43236 478 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 CLCN5P51795 746 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 COL19A1Q14993 1142 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 TBRG1Q3YBR2 411 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 WSCD1Q658N2 575 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 NOXA1Q86UR1 476 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 PLD3Q8IV08 490 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 CCDC117Q8IWD4 279 aaPredicted RBP13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 SLC2A13Q96QE2 648 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 MCMBPQ9BTE3 642 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 BTBD2Q9BX70 525 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms