RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 MAP4P27816 1152 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 CSF2RBP32927 897 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 MAGEA6P43360 314 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 PPM1FP49593 454 aaPredicted RBP13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 MC2RQ01718 297 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 HHEXQ03014 270 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 CDK18Q07002 472 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 TPSAB1Q15661 275 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 SLC14A2Q15849 920 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 QPCTQ16769 361 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 GLE1Q53GS7 698 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 DENND5AQ6IQ26 1287 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 HIBCHQ6NVY1 386 aaPredicted RBP13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 IYDQ6PHW0 289 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 C4orf22Q6V702 233 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 MICALCLQ6ZW33 695 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 MARK2Q7KZI7 788 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 ARHGAP22Q7Z5H3 698 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 SLC9B2Q86UD5 537 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 FAM129CQ86XR2 697 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 PPIL6Q8IXY8 311 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 GSPT2Q8IYD1 628 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 AVL9Q8NBF6 648 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 SLC37A2Q8TED4 501 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 ZMYND15Q9H091 742 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 EPB41L1Q9H4G0 881 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 FAM83DQ9H4H8 585 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 ANKZF1Q9H8Y5 726 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 LRRC40Q9H9A6 602 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 FBXO8Q9NRD0 319 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 OCIAD1Q9NX40 245 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 TUBD1Q9UJT1 453 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 ANAPC5Q9UJX4 755 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 SPO11Q9Y5K1 396 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 ZNF891A8MT65 544 aaPredicted RBP13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 INPP4BO15327 924 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 RAD1O60671 282 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 SUN1O94901 812 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 CLDN7O95471 211 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 MPSTP25325 297 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 SPINT3P49223 89 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 CARSP49589 748 aaKnown RBP13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 EPHA4P54764 986 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 PLTPP55058 493 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 CLCA4Q14CN2 919 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 SLC1A5Q15758 541 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 CEACAM20Q6UY09 585 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 RANBP10Q6VN20 620 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 PPP1R21Q6ZMI0 780 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 CHST15Q7LFX5 561 aaPredicted RBP13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 LYSMD3Q7Z3D4 306 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 TRIM74Q86UV6 250 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 AGGF1Q8N302 714 aaeCLIP13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 IFT81Q8WYA0 676 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 SEC14L1Q92503 715 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 SLC45A3Q96JT2 553 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 AGAP2Q99490 1192 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 SPRY4Q9C004 299 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 TRIT1Q9H3H1 467 aaKnown RBP13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 CASS4Q9NQ75 786 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 EIF2B3Q9NR50 452 aaKnown RBP13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 PKD2L2Q9NZM6 624 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 TMEM9Q9P0T7 183 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 WHRNQ9P202 907 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 PILRAQ9UKJ1 303 aa13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 CNOT6Q9ULM6 557 aaKnown RBP13.54□□□□□ -0.24
PDLIM2-213ENST00000448520 BSNQ9UPA5 3926 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 KIR2DS5A0A0G2JLQ3 304 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 A0A0G2JNG1 304 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 CCDC78A2IDD5 438 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 ANKRD66B4E2M5 251 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 KIR2DS3K7RE56 304 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 PSMD3O43242 534 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 SLC4A1P02730 911 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 LIFP15018 202 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 ECHS1P30084 290 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 CCR10P46092 362 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 SESN2P58004 480 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 CRADDP78560 199 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 KIR2DS5Q14953 304 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 MSS51Q4VC12 460 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 HP1BP3Q5SSJ5 553 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 FNBP1LQ5T0N5 605 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 HENMT1Q5T8I9 393 aaKnown RBP13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 ANKS6Q68DC2 871 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 CCDC70Q6NSX1 233 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 CAND1Q86VP6 1230 aaKnown RBP13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 NLGN4XQ8N0W4 816 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 MPP5Q8N3R9 675 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 BMPERQ8N8U9 685 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 NLGN4YQ8NFZ3 816 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 FBXO25Q8TCJ0 367 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 NCSTNQ92542 709 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 UBXN4Q92575 508 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 KIAA1143Q96AT1 154 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 SERPINB12Q96P63 405 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 ADGRE3Q9BY15 652 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 ZDHHC18Q9NUE0 388 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms