RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 NEDD8-MDP1E9PL57 170 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 F5H0A9 414 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-202ENST00000448238 INPPL1O15357 1258 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 HDAC3O15379 428 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 ATP6AP2O75787 350 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 LIMK2P53671 638 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 CYCSP99999 105 aaKnown RBP8.85□□□□□ -0.99
NIPBL-202ENST00000448238 PRKD1Q15139 912 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-202ENST00000448238 NTRK2Q16620 822 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 PI16Q6UXB8 463 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 TMPRSS7Q7RTY8 843 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 COG8Q96MW5 612 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 ERGIC2Q96RQ1 377 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 SLCO1B3Q9NPD5 702 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 CD320Q9NPF0 282 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 SMCO4Q9NRQ5 59 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 LIN7CQ9NUP9 197 aaKnown RBP8.85□□□□□ -0.99
NIPBL-202ENST00000448238 RLIMQ9NVW2 624 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 CYP8B1Q9UNU6 501 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 C2CD2LO14523 706 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 PIP5K1BO14986 540 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 NME6O75414 186 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-202ENST00000448238 KELP23276 732 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 HOXC9P31274 260 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 ABL2P42684 1182 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 PLK1P53350 603 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 ATP6V0D1P61421 351 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 TATDN1Q6P1N9 297 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 RGL4Q8IZJ4 473 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 KLHL36Q8N4N3 616 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 PCDH20Q8N6Y1 951 aaKnown RBP8.85□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF676Q8N7Q3 588 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 RSC1A1Q92681 617 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 ELMO3Q96BJ8 720 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 CAMK1GQ96NX5 476 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 CPXM1Q96SM3 734 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 SDHAF2Q9NX18 166 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 FBXL21Q9UKT6 434 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 XYLBO75191 536 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 IL12BP29460 328 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 EXOC3L2Q2M3D2 409 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 KCNIP4Q6PIL6 250 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 CRTC1Q6UUV9 634 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 OR2T34Q8NGX1 318 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 OR2T3Q8NH03 318 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 PEX13Q92968 403 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF286AQ9HBT8 521 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 SLC7A8Q9UHI5 535 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 H0Y858 1186 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 TNFRSF11BO00300 401 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 C22orf31O95567 290 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 PLGP00747 810 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-202ENST00000448238 CHRNB1P11230 501 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 HGFP14210 728 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF16P17020 682 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-202ENST00000448238 VARSP26640 1264 aaKnown RBP8.84□□□□□ -0.99
NIPBL-202ENST00000448238 BMPR2Q13873 1038 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 RBM48Q5RL73 367 aaKnown RBP8.84□□□□□ -0.99
NIPBL-202ENST00000448238 TAS1R3Q7RTX0 852 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 GRIN3AQ8TCU5 1115 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 HTR3CQ8WXA8 447 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 EIF2B4Q9UI10 523 aaKnown RBP8.84□□□□□ -0.99
NIPBL-202ENST00000448238 RAP2CQ9Y3L5 183 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 A0A087X0B3 334 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 OAZ2O95190 189 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 FABP3P05413 133 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 ETS2P15036 469 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 SLC6A9P48067 706 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 RPP30P78346 268 aaKnown RBP8.84□□□□□ -0.99
NIPBL-202ENST00000448238 NIPAL4Q0D2K0 466 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 GPR149Q86SP6 731 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 PDZD9Q8IXQ8 264 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 SUSD6Q92537 303 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 SNX27Q96L92 541 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 PRMT6Q96LA8 375 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-202ENST00000448238 CXorf21Q9HAI6 301 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.84□□□□□ -0.991e-9■■■□□ 15.8
NIPBL-202ENST00000448238 DISP3Q9P2K9 1392 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 FGF10O15520 208 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-202ENST00000448238 CBX6O95503 412 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 HOXC6P09630 235 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 RYKP34925 604 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 RNF4P78317 190 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 PTPN11Q06124 597 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-202ENST00000448238 SREBF2Q12772 1141 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 SMARCB1Q12824 385 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 DALRD3Q5D0E6 543 aaKnown RBP8.84□□□□□ -0.99
NIPBL-202ENST00000448238 TTLL10Q6ZVT0 673 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 LINC00471Q8N535 108 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF570Q96NI8 536 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 SLC6A16Q9GZN6 736 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 RNF121Q9H920 327 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 AKAP6Q13023 2319 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 GRIN2BQ13224 1484 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 DAPL1A0PJW8 107 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF705GA8MUZ8 300 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-202ENST00000448238 CIDEAO60543 219 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 PLATP00750 562 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF33AQ06730 810 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 ACVR2BQ13705 512 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms