RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 PIEZO2Q9H5I5 2752 aa17.34■□□□□ 0.37
DDX56-207ENST00000448192 LRRC40Q9H9A6 602 aa17.34■□□□□ 0.37
DDX56-207ENST00000448192 IMP3Q9NV31 184 aaKnown RBP17.34■□□□□ 0.37
DDX56-207ENST00000448192 PILRAQ9UKJ1 303 aa17.34■□□□□ 0.37
DDX56-207ENST00000448192 GUCA1BQ9UMX6 200 aa17.34■□□□□ 0.37
DDX56-207ENST00000448192 CFAP20Q9Y6A4 193 aaKnown RBP17.34■□□□□ 0.37
DDX56-207ENST00000448192 MGAT4DA6NG13 374 aa17.33■□□□□ 0.36
DDX56-207ENST00000448192 LDB2O43679 373 aa17.33■□□□□ 0.36
DDX56-207ENST00000448192 KIF1CO43896 1103 aaKnown RBP17.33■□□□□ 0.36
DDX56-207ENST00000448192 SEPT6Q14141 434 aa17.33■□□□□ 0.36
DDX56-207ENST00000448192 PLCL1Q15111 1095 aa17.33■□□□□ 0.36
DDX56-207ENST00000448192 P3H1Q32P28 736 aa17.33■□□□□ 0.36
DDX56-207ENST00000448192 KCTD11Q693B1 232 aa17.33■□□□□ 0.36
DDX56-207ENST00000448192 FAM92BQ6ZTR7 304 aa17.33■□□□□ 0.36
DDX56-207ENST00000448192 KLHDC8BQ8IXV7 354 aa17.33■□□□□ 0.36
DDX56-207ENST00000448192 NXPE1Q8N323 547 aa17.33■□□□□ 0.36
DDX56-207ENST00000448192 ATG4AQ8WYN0 398 aa17.33■□□□□ 0.36
DDX56-207ENST00000448192 EXTL1Q92935 676 aa17.33■□□□□ 0.36
DDX56-207ENST00000448192 ULK4Q96C45 1275 aa17.33■□□□□ 0.36
DDX56-207ENST00000448192 ZDHHC12Q96GR4 267 aa17.33■□□□□ 0.36
DDX56-207ENST00000448192 DNAJC1Q96KC8 554 aaKnown RBP17.33■□□□□ 0.36
DDX56-207ENST00000448192 ARHGAP9Q9BRR9 750 aa17.33■□□□□ 0.36
DDX56-207ENST00000448192 TSGA10Q9BZW7 698 aa17.33■□□□□ 0.36
DDX56-207ENST00000448192 WWP1Q9H0M0 922 aa17.33■□□□□ 0.36
DDX56-207ENST00000448192 PIH1D1Q9NWS0 290 aaKnown RBP17.33■□□□□ 0.36
DDX56-207ENST00000448192 AGAP14A8MT82 685 aa17.32■□□□□ 0.36
DDX56-207ENST00000448192 TOX3O15405 576 aaPredicted RBP17.32■□□□□ 0.36
DDX56-207ENST00000448192 KRT86O43790 486 aa17.32■□□□□ 0.36
DDX56-207ENST00000448192 POLBP06746 335 aa17.32■□□□□ 0.36
DDX56-207ENST00000448192 MTHFD1P11586 935 aaKnown RBP17.32■□□□□ 0.36
DDX56-207ENST00000448192 LIFP15018 202 aa17.32■□□□□ 0.36
DDX56-207ENST00000448192 MC4RP32245 332 aa17.32■□□□□ 0.36
DDX56-207ENST00000448192 POU6F1Q14863 301 aa17.32■□□□□ 0.36
DDX56-207ENST00000448192 BCL7AQ4VC05 210 aa17.32■□□□□ 0.36
DDX56-207ENST00000448192 SEL1L2Q5TEA6 688 aa17.32■□□□□ 0.36
DDX56-207ENST00000448192 CACHD1Q5VU97 1274 aa17.32■□□□□ 0.36
DDX56-207ENST00000448192 SNX20Q7Z614 316 aa17.32■□□□□ 0.36
DDX56-207ENST00000448192 CFAP206Q8IYR0 622 aa17.32■□□□□ 0.36
DDX56-207ENST00000448192 NLGN4XQ8N0W4 816 aa17.32■□□□□ 0.36
DDX56-207ENST00000448192 NLGN4YQ8NFZ3 816 aaPredicted RBP17.32■□□□□ 0.36
DDX56-207ENST00000448192 OR2L2Q8NH16 312 aa17.32■□□□□ 0.36
DDX56-207ENST00000448192 RNF31Q96EP0 1072 aa17.32■□□□□ 0.36
DDX56-207ENST00000448192 MED8Q96G25 268 aa17.32■□□□□ 0.36
DDX56-207ENST00000448192 INSM2Q96T92 566 aaPredicted RBP17.32■□□□□ 0.36
DDX56-207ENST00000448192 COPS8Q99627 209 aa17.32■□□□□ 0.36
DDX56-207ENST00000448192 ZNF768Q9H5H4 540 aaKnown RBP17.32■□□□□ 0.36
DDX56-207ENST00000448192 SIDT1Q9NXL6 827 aaKnown RBP17.32■□□□□ 0.36
DDX56-207ENST00000448192 ACSL5Q9ULC5 683 aa17.32■□□□□ 0.36
DDX56-207ENST00000448192 KLHL33A6NCF5 533 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 CFAP99D6REC4 459 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 PSMD3O43242 534 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 SGTAO43765 313 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 STK17BO94768 372 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 ITGB2P05107 769 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 SLC35G4P0C7Q5 338 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 GSDMDP57764 484 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 SH3BP2P78314 561 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 GSE1Q14687 1217 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 LINC00303Q3SY05 128 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 GPR33Q49SQ1 333 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 ZRANB3Q5FWF4 1079 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 DUS1LQ6P1R4 473 aaKnown RBP17.31■□□□□ 0.36
DDX56-207ENST00000448192 KLHL35Q6PF15 583 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 MICALCLQ6ZW33 695 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 TAS2R42Q7RTR8 314 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 ZNF605Q86T29 641 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 SPDYE1Q8NFV5 336 aaPredicted RBP17.31■□□□□ 0.36
DDX56-207ENST00000448192 C12orf66Q96MD2 445 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 ALS2CR12Q96Q35 445 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 OR6C1Q96RD1 312 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 C19orf43Q9BQ61 176 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 SPRY4Q9C004 299 aa17.31■□□□□ 0.36
DDX56-207ENST00000448192 NLE1Q9NVX2 485 aaPredicted RBP17.31■□□□□ 0.36
DDX56-207ENST00000448192 AP2A1O95782 977 aa17.3■□□□□ 0.36
DDX56-207ENST00000448192 ATP1B2P14415 290 aaPredicted RBP17.3■□□□□ 0.36
DDX56-207ENST00000448192 MAP4P27816 1152 aaKnown RBP17.3■□□□□ 0.36
DDX56-207ENST00000448192 CDKN1CP49918 316 aaPredicted RBP17.3■□□□□ 0.36
DDX56-207ENST00000448192 PPP1CAP62136 330 aa17.3■□□□□ 0.36
DDX56-207ENST00000448192 TIPARPQ7Z3E1 657 aaKnown RBP17.3■□□□□ 0.36
DDX56-207ENST00000448192 PRSS42Q7Z5A4 293 aa17.3■□□□□ 0.36
DDX56-207ENST00000448192 SERPINA9Q86WD7 417 aa17.3■□□□□ 0.36
DDX56-207ENST00000448192 UNC5BQ8IZJ1 945 aa17.3■□□□□ 0.36
DDX56-207ENST00000448192 LILRA3Q8N6C8 439 aaPredicted RBP17.3■□□□□ 0.36
DDX56-207ENST00000448192 EXD3Q8N9H8 876 aa17.3■□□□□ 0.36
DDX56-207ENST00000448192 HEXDCQ8WVB3 486 aa17.3■□□□□ 0.36
DDX56-207ENST00000448192 KIAA1143Q96AT1 154 aaPredicted RBP17.3■□□□□ 0.36
DDX56-207ENST00000448192 ELMO2Q96JJ3 720 aa17.3■□□□□ 0.36
DDX56-207ENST00000448192 LINC00615Q96LM1 132 aaPredicted RBP17.3■□□□□ 0.36
DDX56-207ENST00000448192 SLC12A9Q9BXP2 914 aa17.3■□□□□ 0.36
DDX56-207ENST00000448192 RAB33BQ9H082 229 aa17.3■□□□□ 0.36
DDX56-207ENST00000448192 GPN2Q9H9Y4 310 aaPredicted RBP17.3■□□□□ 0.36
DDX56-207ENST00000448192 ZDHHC3Q9NYG2 299 aa17.3■□□□□ 0.36
DDX56-207ENST00000448192 EPHA6Q9UF33 1036 aa17.3■□□□□ 0.36
DDX56-207ENST00000448192 TMEM184BQ9Y519 407 aaPredicted RBP17.3■□□□□ 0.36
DDX56-207ENST00000448192 PIKFYVEQ9Y2I7 2098 aa17.29■□□□□ 0.36
DDX56-207ENST00000448192 CCDC78A2IDD5 438 aa17.29■□□□□ 0.36
DDX56-207ENST00000448192 LIASO43766 372 aa17.29■□□□□ 0.36
DDX56-207ENST00000448192 IFNB1P01574 187 aa17.29■□□□□ 0.36
DDX56-207ENST00000448192 PRSS56P0CW18 603 aa17.29■□□□□ 0.36
DDX56-207ENST00000448192 STIP1P31948 543 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms