RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 BOLA2-SMG1P6H3BVE0 249 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 LSM1O15116 133 aaKnown RBP18.82■□□□□ 0.6
SDCBP-204ENST00000447182 NIPSNAP2O75323 286 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 GMNNO75496 209 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 SULT1C4O75897 302 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 G6PDP11413 515 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 GRK4P32298 578 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 MAGEA11P43364 429 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 CDKN1CP49918 316 aaPredicted RBP18.82■□□□□ 0.6
SDCBP-204ENST00000447182 NADSYN1Q6IA69 706 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 SULT1C3Q6IMI6 304 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 SPARTQ8N0X7 666 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 KCNJ9Q92806 393 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 NSMCE3Q96MG7 304 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 OSBPL10Q9BXB5 764 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 MAGEE1Q9HCI5 957 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 NUDT4Q9NZJ9 180 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 MAGED1Q9Y5V3 778 aaPredicted RBP18.82■□□□□ 0.6
SDCBP-204ENST00000447182 DUSP11O75319 330 aaKnown RBP18.82■□□□□ 0.6
SDCBP-204ENST00000447182 MTA1Q13330 715 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 PCBP2Q15366 365 aaKnown RBP eCLIP18.82■□□□□ 0.6
SDCBP-204ENST00000447182 C5orf22Q49AR2 442 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 C10orf120Q5SQS8 335 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 PIANPQ8IYJ0 282 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 SVOPLQ8N434 492 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 SLC15A4Q8N697 577 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 BPIFB6Q8NFQ5 453 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 OR52E4Q8NGH9 312 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 METTL6Q8TCB7 284 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 SDCCAG3Q96C92 435 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 RMDN1Q96DB5 314 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 CSF3RQ99062 836 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 MAGEH1Q9H213 219 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 COMMD10Q9Y6G5 202 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 SLC12A8A0AV02 714 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 KATNA1O75449 491 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 DNAJB5O75953 348 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 PRLP01236 227 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 CAPN1P07384 714 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 PCNAP12004 261 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 AKR1A1P14550 325 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 TACR2P21452 398 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 LPOP22079 712 aaPredicted RBP18.81■□□□□ 0.6
SDCBP-204ENST00000447182 NFKBIAP25963 317 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 TPP2P29144 1249 aaPredicted RBP18.81■□□□□ 0.6
SDCBP-204ENST00000447182 PLA2G16P53816 162 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 PPP2R2BQ00005 443 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 RELAQ04206 551 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 CBX3Q13185 183 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 KIAA0040Q15053 153 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 GNASQ5JWF2 1037 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 C6orf141Q5SZD1 244 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 C9orf131Q5VYM1 1079 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 PSAPL1Q6NUJ1 521 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 IL27RAQ6UWB1 636 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 CXCL17Q6UXB2 119 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 ZNF598Q86UK7 904 aaKnown RBP18.81■□□□□ 0.6
SDCBP-204ENST00000447182 KLHDC9Q8NEP7 349 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 FBXO32Q969P5 355 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 CDK15Q96Q40 435 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 ADNPQ9H2P0 1102 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 BLOC1S6Q9UL45 172 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 PCDHB5Q9Y5E4 795 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 PCDHGA8Q9Y5G5 932 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 TNPO3Q9Y5L0 923 aaKnown RBP18.81■□□□□ 0.6
SDCBP-204ENST00000447182 CORINQ9Y5Q5 1042 aa18.81■□□□□ 0.6
SDCBP-204ENST00000447182 A0A0D9SEW6 157 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 CFAP99D6REC4 459 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 ATP6V1G1O75348 118 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 KCNH1O95259 989 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 HMBSP08397 361 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 CR2P20023 1033 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 HTR6P50406 440 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 BCAP31P51572 246 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 NR1D2Q14995 579 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 SPRYD7Q5W111 196 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 NECAB2Q7Z6G3 386 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 GALNT13Q8IUC8 556 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 DCBLD1Q8N8Z6 715 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 CHDHQ8NE62 594 aaPredicted RBP18.8■□□□□ 0.6
SDCBP-204ENST00000447182 PDZD8Q8NEN9 1154 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 OR2T12Q8NG77 320 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 FKBP10Q96AY3 582 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 MBOAT4Q96T53 435 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 BEGAINQ9BUH8 593 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 RAD21L1Q9H4I0 556 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 CARS2Q9HA77 564 aaKnown RBP18.8■□□□□ 0.6
SDCBP-204ENST00000447182 TLR8Q9NR97 1041 aaKnown RBP18.8■□□□□ 0.6
SDCBP-204ENST00000447182 ERGIC3Q9Y282 383 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 K7EPI3 171 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 INSIG1O15503 277 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 TBC1D4O60343 1298 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 OR1I1O60431 355 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 FUCA1P04066 466 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 HTR1AP08908 422 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 RGRP47804 291 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 PSMD7P51665 324 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 DGKQP52824 942 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 MAPK10P53779 464 aa18.8■□□□□ 0.6
SDCBP-204ENST00000447182 TOP3AQ13472 1001 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms