RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 RPE65Q16518 533 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 METRNLQ641Q3 311 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 TMEM26Q6ZUK4 368 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 RAB11FIP2Q7L804 512 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 CFAP206Q8IYR0 622 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 OR10G6Q8NH81 332 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 WDR36Q8NI36 951 aaKnown RBP14.53□□□□□ -0.08
HDAC4-204ENST00000446876 HM13Q8TCT9 377 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.53□□□□□ -0.084e-6■■■■■ 42.6
HDAC4-204ENST00000446876 SH3KBP1Q96B97 665 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 GRAMD1AQ96CP6 724 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 MFSD3Q96ES6 412 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 RMDN2Q96LZ7 410 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 INSM2Q96T92 566 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-204ENST00000446876 STRADBQ9C0K7 418 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 ASCL3Q9NQ33 180 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 KCND1Q9NSA2 647 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 POT1Q9NUX5 634 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 IMP3Q9NV31 184 aaKnown RBP14.53□□□□□ -0.08
HDAC4-204ENST00000446876 OGFRQ9NZT2 677 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 ASIC3Q9UHC3 531 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 LOXL2Q9Y4K0 774 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 LILRA5A6NI73 299 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 PLD2O14939 933 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 ZW10O43264 779 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 TYRP1P17643 537 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 ITIH1P19827 911 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 ARNTP27540 789 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 NSG1P42857 185 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 PREPP48147 710 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 GPLD1P80108 840 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 PTK6Q13882 451 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 ITIH4Q14624 930 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 TBC1D25Q3MII6 688 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 ZNF658BQ4V348 819 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-204ENST00000446876 FASTKD1Q53R41 847 aaKnown RBP14.52□□□□□ -0.09
HDAC4-204ENST00000446876 SNAP47Q5SQN1 464 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 NAPRTQ6XQN6 538 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 AGGF1Q8N302 714 aaeCLIP14.52□□□□□ -0.09
HDAC4-204ENST00000446876 FBXO39Q8N4B4 442 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 NAT8LQ8N9F0 302 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 AVL9Q8NBF6 648 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 NCSTNQ92542 709 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 PEX13Q92968 403 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 C12orf66Q96MD2 445 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 SERPINB12Q96P63 405 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 DCBLD2Q96PD2 775 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 CCM2Q9BSQ5 444 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 KIFC1Q9BW19 673 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-204ENST00000446876 COG4Q9H9E3 785 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 SLC40A1Q9NP59 571 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 CATSPERZQ9NTU4 200 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 PISDQ9UG56 409 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 KLHL3Q9UH77 587 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 PCYOX1Q9UHG3 505 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 SOX13Q9UN79 622 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 DMXL2Q8TDJ6 3036 aa14.52□□□□□ -0.09
HDAC4-204ENST00000446876 A8MU76 341 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 GOLGA8KD6RF30 607 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 GOLGA8TH3BQL2 631 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 AP3B1O00203 1094 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 TNFSF15O95150 251 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 SLC35G4P0C7Q5 338 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 THRAP10827 490 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 MTHFD1P11586 935 aaKnown RBP14.51□□□□□ -0.09
HDAC4-204ENST00000446876 ITGB6P18564 788 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 PDHA2P29803 388 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 ETV5P41161 510 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 LIMK2P53671 638 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 EPHA4P54764 986 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 GFERP55789 205 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 SARNPP82979 210 aaKnown RBP14.51□□□□□ -0.09
HDAC4-204ENST00000446876 SQSTM1Q13501 440 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 BRD3Q15059 726 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 RNASEH2BQ5TBB1 312 aaKnown RBP14.51□□□□□ -0.09
HDAC4-204ENST00000446876 CASC4Q6P4E1 433 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 TMEM71Q6P5X7 295 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 PACS1Q6VY07 963 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 SYT10Q6XYQ8 523 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 OTUD6BQ8N6M0 293 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 MCUQ8NE86 351 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 OR4D9Q8NGE8 314 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 LKAAEAR1Q8TD35 194 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 RSC1A1Q92681 617 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 TRIM51Q9BSJ1 452 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 UCK1Q9HA47 277 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 MRM3Q9HC36 420 aaKnown RBP14.51□□□□□ -0.09
HDAC4-204ENST00000446876 IL1RAPL1Q9NZN1 696 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 ACSL5Q9ULC5 683 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 PCDHGA8Q9Y5G5 932 aa14.51□□□□□ -0.09
HDAC4-204ENST00000446876 URB1O60287 2271 aaKnown RBP14.5□□□□□ -0.09
HDAC4-204ENST00000446876 TMX2-CTNND1H3BSU7 103 aa14.5□□□□□ -0.09
HDAC4-204ENST00000446876 DNALI1O14645 258 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-204ENST00000446876 CD3EAPO15446 510 aaKnown RBP14.5□□□□□ -0.09
HDAC4-204ENST00000446876 BANF1O75531 89 aa14.5□□□□□ -0.09
HDAC4-204ENST00000446876 DXOO77932 396 aaKnown RBP14.5□□□□□ -0.09
HDAC4-204ENST00000446876 UBXN7O94888 489 aa14.5□□□□□ -0.09
HDAC4-204ENST00000446876 AP2A2O94973 939 aa14.5□□□□□ -0.09
HDAC4-204ENST00000446876 VAPBO95292 243 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms