RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 MSI1O43347 362 aaKnown RBP8.45□□□□□ -1.06
PTPN3-204ENST00000446349 COX4I1P13073 169 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 ATP6V1B1P15313 513 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 GTF2H2Q13888 395 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 SF3B4Q15427 424 aaKnown RBP eCLIP8.45□□□□□ -1.06
PTPN3-204ENST00000446349 GTF2H2CQ6P1K8 395 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 KCTD4Q8WVF5 259 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 EPYCQ99645 322 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 SLC32A1Q9H598 525 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 TMED5Q9Y3A6 229 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 TCRBV9S1A1TA0A576 114 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 UPK3BL1B0FP48 263 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 UPK3BL2E5RIL1 263 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 SLC31A1O15431 190 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 ACTR1BP42025 376 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 CDKN2BP42772 138 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 OMPP47874 163 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 CLCN7P51798 805 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 RGS8P57771 180 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-204ENST00000446349 AAGABQ6PD74 315 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 SCIMPQ6UWF3 145 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 UNQ6126/PRO20091Q6UXV3 157 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 SLC36A4Q6YBV0 504 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 LRRC70Q7Z2Q7 622 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 ADGRD2Q7Z7M1 963 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 CNTD1Q8N815 330 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 SEMA4DQ92854 862 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 C1QTNF1Q9BXJ1 281 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 PIF1Q9H611 641 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 DLGAP2Q9P1A6 1054 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 PCDHGB1Q9Y5G3 927 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 OR1F1O43749 312 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 TULP3O75386 442 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 LRCH4O75427 683 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 UBOX5O94941 541 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 LCA5LO95447 670 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 GJB6O95452 261 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 TOP3BO95985 862 aaKnown RBP8.45□□□□□ -1.06
PTPN3-204ENST00000446349 DPYSQ14117 519 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 TAC4Q86UU9 113 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 PRELID2Q8N945 189 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 PIGXQ8TBF5 258 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 GPR152Q8TDT2 470 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 C12orf66Q96MD2 445 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 KREMEN1Q96MU8 473 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 OSBPL11Q9BXB4 747 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 TTYH1Q9H313 450 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-204ENST00000446349 NMUR1Q9HB89 426 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 LRP6O75581 1613 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 SP100P23497 879 aaPredicted RBP8.44□□□□□ -1.06
PTPN3-204ENST00000446349 LIMK2P53671 638 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 RPS21P63220 83 aaKnown RBP8.44□□□□□ -1.06
PTPN3-204ENST00000446349 FLCNQ8NFG4 579 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 FBXL18Q96ME1 805 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 DPYSL5Q9BPU6 564 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 CLCA3PQ9Y6N3 262 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 H0YC42 278 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 MATN2O00339 956 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 FGFR3P22607 806 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 ACTR1AP61163 376 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 SP140Q13342 867 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 SMCO1Q147U7 214 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 FAM180AQ6UWF9 173 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 CPSF7Q8N684 471 aaKnown RBP8.44□□□□□ -1.06
PTPN3-204ENST00000446349 GDPD5Q8WTR4 605 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 DGAT2Q96PD7 388 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 VGLL3A8MV65 326 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 AGPSO00116 658 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 ZNF217O75362 1048 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 SEC13P55735 322 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 RHAGQ02094 409 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 GDF6Q6KF10 455 aaPredicted RBP8.44□□□□□ -1.06
PTPN3-204ENST00000446349 FIP1L1Q6UN15 594 aaKnown RBP8.44□□□□□ -1.06
PTPN3-204ENST00000446349 DCAF4L2Q8NA75 395 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 OR2AP1Q8NGE2 309 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 PEX13Q92968 403 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 TFB2MQ9H5Q4 396 aaKnown RBP8.44□□□□□ -1.06
PTPN3-204ENST00000446349 MRM3Q9HC36 420 aaKnown RBP8.44□□□□□ -1.06
PTPN3-204ENST00000446349 FBXL12Q9NXK8 326 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 PTGFRNQ9P2B2 879 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 NCDNQ9UBB6 729 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 GNEQ9Y223 722 aaKnown RBP8.44□□□□□ -1.06
PTPN3-204ENST00000446349 PCDHAC2Q9Y5I4 1007 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 DHRS12A0PJE2 317 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 LIN7AO14910 233 aaPredicted RBP8.44□□□□□ -1.06
PTPN3-204ENST00000446349 CST1P01037 141 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 KCNA5P22460 613 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 SLC13A2Q13183 592 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 LPIN1Q14693 890 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 FAM214AQ32MH5 1076 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 CUZD1Q86UP6 607 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 TMEM145Q8NBT3 493 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 ADAMTS18Q8TE60 1221 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 ROPN1LQ96C74 230 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 KIFC1Q9BW19 673 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 MAT2BQ9NZL9 334 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 BTBD3Q9Y2F9 522 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 INSL5Q9Y5Q6 135 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 A0A0J9YVX5 310 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 FAM221BA6H8Z2 402 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms