RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 MALT1Q9UDY8 824 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 ACADLP28330 430 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 EEFSECP57772 596 aaKnown RBP18.41■□□□□ 0.54
SHANK3-203ENST00000445220 MAXP61244 160 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 EFR3AQ14156 821 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 SETMARQ53H47 684 aaPredicted RBP18.41■□□□□ 0.54
SHANK3-203ENST00000445220 ABHD15Q6UXT9 468 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 FSTL5Q8N475 847 aaPredicted RBP18.41■□□□□ 0.54
SHANK3-203ENST00000445220 FTHL17Q9BXU8 183 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 FGFBP2Q9BYJ0 223 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 SEMA3GQ9NS98 782 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 TRPS1Q9UHF7 1281 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 FBP2O00757 339 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 DNTTP04053 509 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 ARFIP1P53367 373 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 MRPS5P82675 430 aaKnown RBP18.41■□□□□ 0.54
SHANK3-203ENST00000445220 SYT16Q17RD7 645 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 ZNF697Q5TEC3 545 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 ADNP2Q6IQ32 1131 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 XKRXQ6PP77 449 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 TMIEQ8NEW7 156 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 RDH8Q9NYR8 311 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 hCG_2039718K7EN88 272 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 PQBP1O60828 265 aaKnown RBP18.41■□□□□ 0.54
SHANK3-203ENST00000445220 GSTT2BP0CG30 244 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 KLRC2P26717 231 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 CDH5P33151 784 aaPredicted RBP18.41■□□□□ 0.54
SHANK3-203ENST00000445220 FKBP1BP68106 108 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 DNASE1L3Q13609 305 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 TGFBIQ15582 683 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 SLC25A52Q3SY17 297 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 FBXO43Q4G163 708 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 XYLT1Q86Y38 959 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 CEP295NLQ96MC4 621 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 LRRC3Q9BY71 257 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.41■□□□□ 0.543e-6■■■□□ 17.8
SHANK3-203ENST00000445220 LMAN2LQ9H0V9 348 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 SPATA7Q9P0W8 599 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 PCDHAC2Q9Y5I4 1007 aa18.41■□□□□ 0.54
SHANK3-203ENST00000445220 PIP5K1BO14986 540 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 CHP2O43745 196 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 CDC40O60508 579 aaKnown RBP eCLIP18.4■□□□□ 0.545e-8■■■■□ 25.9
SHANK3-203ENST00000445220 B4GALT4O60513 344 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 PABPC4LP0CB38 370 aaKnown RBP18.4■□□□□ 0.54
SHANK3-203ENST00000445220 CDH12P55289 794 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 SKP1P63208 163 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 SP3Q02447 781 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 COL9A3Q14050 684 aaPredicted RBP18.4■□□□□ 0.54
SHANK3-203ENST00000445220 RAP1GAP2Q684P5 730 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 CYP2U1Q7Z449 544 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 CRELD1Q96HD1 420 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 NUSAP1Q9BXS6 441 aaKnown RBP18.4■□□□□ 0.54
SHANK3-203ENST00000445220 POLR2J2Q9GZM3 115 aaKnown RBP18.4■□□□□ 0.54
SHANK3-203ENST00000445220 MC4RP32245 332 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 CBLBQ13191 982 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 ZNF730Q6ZMV8 503 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 ITPAQ9BY32 194 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 TEX46H3BTG2 121 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 AKAP8O43823 692 aaKnown RBP18.4■□□□□ 0.54
SHANK3-203ENST00000445220 PKMP14618 531 aaKnown RBP18.4■□□□□ 0.54
SHANK3-203ENST00000445220 CCNCP24863 283 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 RBBP4Q09028 425 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 ASTE1Q2TB18 679 aaPredicted RBP18.4■□□□□ 0.54
SHANK3-203ENST00000445220 BEND5Q7L4P6 421 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 ING5Q8WYH8 240 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 RPP40O75818 363 aaKnown RBP18.4■□□□□ 0.54
SHANK3-203ENST00000445220 FGBP02675 491 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 ZNF404Q494X3 552 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 RAD51AP1Q96B01 352 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 ART5Q96L15 291 aa18.4■□□□□ 0.54
SHANK3-203ENST00000445220 FAM124BQ9H5Z6 455 aaPredicted RBP18.4■□□□□ 0.54
SHANK3-203ENST00000445220 SCGNO76038 276 aa18.39■□□□□ 0.54
SHANK3-203ENST00000445220 MANFP55145 182 aaKnown RBP18.39■□□□□ 0.54
SHANK3-203ENST00000445220 ZNF234Q14588 700 aa18.39■□□□□ 0.54
SHANK3-203ENST00000445220 DET1Q7L5Y6 550 aa18.39■□□□□ 0.54
SHANK3-203ENST00000445220 GPR142Q7Z601 462 aa18.39■□□□□ 0.54
SHANK3-203ENST00000445220 CLIP4Q8N3C7 705 aa18.39■□□□□ 0.54
SHANK3-203ENST00000445220 CLP1Q92989 425 aaKnown RBP18.39■□□□□ 0.54
SHANK3-203ENST00000445220 ISOC1Q96CN7 298 aa18.39■□□□□ 0.54
SHANK3-203ENST00000445220 MFSD3Q96ES6 412 aa18.39■□□□□ 0.54
SHANK3-203ENST00000445220 TRIM3O75382 744 aaPredicted RBP18.39■□□□□ 0.53
SHANK3-203ENST00000445220 CES1P23141 567 aa18.39■□□□□ 0.53
SHANK3-203ENST00000445220 HECTD3Q5T447 861 aa18.39■□□□□ 0.53
SHANK3-203ENST00000445220 EEF1DP3Q658K8 133 aa18.39■□□□□ 0.53
SHANK3-203ENST00000445220 ZNF773Q6PK81 442 aa18.39■□□□□ 0.53
SHANK3-203ENST00000445220 NETO2Q8NC67 525 aa18.39■□□□□ 0.53
SHANK3-203ENST00000445220 CSGALNACT1Q8TDX6 532 aa18.39■□□□□ 0.53
SHANK3-203ENST00000445220 KLRG1Q96E93 195 aa18.39■□□□□ 0.53
SHANK3-203ENST00000445220 PDGFDQ9GZP0 370 aaPredicted RBP18.39■□□□□ 0.53
SHANK3-203ENST00000445220 TBC1D17Q9HA65 648 aa18.39■□□□□ 0.53
SHANK3-203ENST00000445220 DNMT3LQ9UJW3 386 aa18.39■□□□□ 0.53
SHANK3-203ENST00000445220 TESMINQ9Y4I5 508 aa18.39■□□□□ 0.53
SHANK3-203ENST00000445220 EIF5AP63241 154 aaKnown RBP18.39■□□□□ 0.53
SHANK3-203ENST00000445220 GPR153Q6NV75 609 aa18.39■□□□□ 0.53
SHANK3-203ENST00000445220 METTL3Q86U44 580 aaKnown RBP18.39■□□□□ 0.53
SHANK3-203ENST00000445220 CPXM1Q96SM3 734 aa18.39■□□□□ 0.53
SHANK3-203ENST00000445220 TMEM39AQ9NV64 488 aa18.39■□□□□ 0.53
SHANK3-203ENST00000445220 HSPB11Q9Y547 144 aa18.39■□□□□ 0.53
SHANK3-203ENST00000445220 SH3PXD2BA1X283 911 aa18.39■□□□□ 0.53
SHANK3-203ENST00000445220 PORP16435 677 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms