RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 LYPLAL1Q5VWZ2 237 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 TTC27Q6P3X3 843 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 AGBL5Q8NDL9 886 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 RCBTB1Q8NDN9 531 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 PPHLN1Q8NEY8 458 aaKnown RBP18.25■□□□□ 0.51
CCDC188-202ENST00000444532 HM13Q8TCT9 377 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 COG1Q8WTW3 980 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 HDAC10Q969S8 669 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.25■□□□□ 0.51
CCDC188-202ENST00000444532 SGSM3Q96HU1 749 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 TTC1Q99614 292 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 CCM2Q9BSQ5 444 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 AP1M1Q9BXS5 423 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 TMEM9Q9P0T7 183 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 PSMD13Q9UNM6 376 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 KRT14P02533 472 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 PRSS56P0CW18 603 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 AMD1P17707 334 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 ITIH1P19827 911 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 MPSTP25325 297 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 ITPKBP27987 946 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 FOXN2P32314 431 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 COILP38432 576 aaPredicted RBP18.24■□□□□ 0.51
CCDC188-202ENST00000444532 NSG1P42857 185 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 GPR18Q14330 331 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 ITIH4Q14624 930 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 DBN1Q16643 649 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 COL28A1Q2UY09 1125 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 AFTPHQ6ULP2 937 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 CERS6Q6ZMG9 384 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 ARHGAP22Q7Z5H3 698 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 JAMLQ86YT9 394 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 SPACA3Q8IXA5 215 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 CFAP206Q8IYR0 622 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 NAT14Q8WUY8 206 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 ZFPM2Q8WW38 1151 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 KCNE4Q8WWG9 221 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 IL22Q9GZX6 179 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 SMARCAL1Q9NZC9 954 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 BFARQ9NZS9 450 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 SLC2A6Q9UGQ3 507 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 ACSL6Q9UKU0 697 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 ITPR1Q14643 2758 aa18.24■□□□□ 0.51
CCDC188-202ENST00000444532 GOLGA6L10A0A0M3HER8 536 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 OR51F1A6NGY5 319 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 QSOX1O00391 747 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 SLC35G4P0C7Q5 338 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 MTHFD1P11586 935 aaKnown RBP18.23■□□□□ 0.51
CCDC188-202ENST00000444532 PPARGP37231 505 aaPredicted RBP18.23■□□□□ 0.51
CCDC188-202ENST00000444532 ETV5P41161 510 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 MAPK10P53779 464 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 SESN2P58004 480 aaPredicted RBP18.23■□□□□ 0.51
CCDC188-202ENST00000444532 PRAMEP78395 509 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 SARNPP82979 210 aaKnown RBP18.23■□□□□ 0.51
CCDC188-202ENST00000444532 GPS1Q13098 491 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 TRIP13Q15645 432 aaPredicted RBP18.23■□□□□ 0.51
CCDC188-202ENST00000444532 TMEM164Q5U3C3 297 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 LRRC8BQ6P9F7 803 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 ZNF449Q6P9G9 518 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 CCDC137Q6PK04 289 aaKnown RBP18.23■□□□□ 0.51
CCDC188-202ENST00000444532 PACS1Q6VY07 963 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 CLDN19Q8N6F1 224 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 OR6P1Q8NGX9 317 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 OR4L1Q8NH43 312 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 USP7Q93009 1102 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 NAF1Q96HR8 494 aaKnown RBP18.23■□□□□ 0.51
CCDC188-202ENST00000444532 ZNF778Q96MU6 729 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 WWP1Q9H0M0 922 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 CHRAC1Q9NRG0 131 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 OGFRQ9NZT2 677 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 LHX6Q9UPM6 363 aa18.23■□□□□ 0.51
CCDC188-202ENST00000444532 MN1Q10571 1320 aaPredicted RBP18.23■□□□□ 0.51
CCDC188-202ENST00000444532 PRAMEF33A0A0G2JMD5 474 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 USP27XA6NNY8 438 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 AGRPO00253 132 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 GOT2P00505 430 aaKnown RBP18.22■□□□□ 0.51
CCDC188-202ENST00000444532 C9P02748 559 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 POLBP06746 335 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 FGF3P11487 239 aaPredicted RBP18.22■□□□□ 0.51
CCDC188-202ENST00000444532 CCL4P13236 92 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 TYRP1P17643 537 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 TCP1P17987 556 aaKnown RBP18.22■□□□□ 0.51
CCDC188-202ENST00000444532 MAGEA6P43360 314 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 TLE3Q04726 772 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 SNAP47Q5SQN1 464 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 BROXQ5VW32 411 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 ARMC3Q5W041 872 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 CAPRIN2Q6IMN6 1127 aaKnown RBP18.22■□□□□ 0.51
CCDC188-202ENST00000444532 XKR5Q6UX68 686 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 MICALCLQ6ZW33 695 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 GRK7Q8WTQ7 553 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 C12orf66Q96MD2 445 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 TAAR9Q96RI9 348 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 INSM2Q96T92 566 aaPredicted RBP18.22■□□□□ 0.51
CCDC188-202ENST00000444532 IMP3Q9NV31 184 aaKnown RBP18.22■□□□□ 0.51
CCDC188-202ENST00000444532 FAM8A1Q9UBU6 413 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 HEBP2Q9Y5Z4 205 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 PIKFYVEQ9Y2I7 2098 aa18.22■□□□□ 0.51
CCDC188-202ENST00000444532 CHD6Q8TD26 2715 aa18.21■□□□□ 0.51
CCDC188-202ENST00000444532 A8MU76 341 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms