RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 A8MU76 341 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 B4E171 279 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 APRTP07741 180 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 RPL10P27635 214 aaKnown RBP13.75□□□□□ -0.21
TREX1-202ENST00000444177 TSPAN7P41732 249 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 DRG2P55039 364 aaKnown RBP13.75□□□□□ -0.21
TREX1-202ENST00000444177 BASP1P80723 227 aaKnown RBP13.75□□□□□ -0.21
TREX1-202ENST00000444177 CDH17Q12864 832 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 ZRANB3Q5FWF4 1079 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 SNAP47Q5SQN1 464 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 FNBP1LQ5T0N5 605 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 DRICH1Q6PGQ1 229 aaPredicted RBP13.75□□□□□ -0.21
TREX1-202ENST00000444177 MICALCLQ6ZW33 695 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 ARHGAP22Q7Z5H3 698 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 SNX20Q7Z614 316 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 C11orf96Q7Z7L8 435 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 RASGEF1CQ8N431 466 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 EXD3Q8N9H8 876 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 ZSCAN1Q8NBB4 408 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 AVL9Q8NBF6 648 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 NAT14Q8WUY8 206 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 NKD1Q969G9 470 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 TRIM44Q96DX7 344 aaPredicted RBP13.75□□□□□ -0.21
TREX1-202ENST00000444177 DCUN1D1Q96GG9 259 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 DDA1Q9BW61 102 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.75□□□□□ -0.21
TREX1-202ENST00000444177 ASPSCR1Q9BZE9 553 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 SCHIP1Q9P0W5 487 aaPredicted RBP13.75□□□□□ -0.21
TREX1-202ENST00000444177 CPNE7Q9UBL6 633 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 TTC7AQ9ULT0 858 aaPredicted RBP13.75□□□□□ -0.21
TREX1-202ENST00000444177 PCDHGA4Q9Y5G9 962 aa13.75□□□□□ -0.21
TREX1-202ENST00000444177 B8ZZF3 427 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 POP7O75817 140 aaKnown RBP13.74□□□□□ -0.21
TREX1-202ENST00000444177 SUN1O94901 812 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 VIPP01282 170 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 ITGB2P05107 769 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 RALBP11234 206 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 IDSP22304 550 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 RPL22P35268 128 aaKnown RBP13.74□□□□□ -0.21
TREX1-202ENST00000444177 GRIA1P42261 906 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 HALP42357 657 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 KCNJ1P48048 391 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 ATP1A2P50993 1020 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 EPHA4P54764 986 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 GNG11P61952 73 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 UBE2IP63279 158 aaKnown RBP13.74□□□□□ -0.21
TREX1-202ENST00000444177 MC2RQ01718 297 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 CCDC38Q502W7 563 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 DCAF12Q5T6F0 453 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 XKR5Q6UX68 686 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 AMZ2Q86W34 360 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 FAM129CQ86XR2 697 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 NXPE1Q8N323 547 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 BEND7Q8N7W2 519 aaPredicted RBP13.74□□□□□ -0.21
TREX1-202ENST00000444177 BMPERQ8N8U9 685 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 STYXQ8WUJ0 223 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 EXTL1Q92935 676 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 NAP1L3Q99457 506 aaPredicted RBP13.74□□□□□ -0.21
TREX1-202ENST00000444177 COPS8Q99627 209 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 C19orf43Q9BQ61 176 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 TBC1D10AQ9BXI6 508 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 HOMER3Q9NSC5 361 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 NLE1Q9NVX2 485 aaPredicted RBP13.74□□□□□ -0.21
TREX1-202ENST00000444177 FAM8A1Q9UBU6 413 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 SNX12Q9UMY4 172 aa13.74□□□□□ -0.21
TREX1-202ENST00000444177 DRG1Q9Y295 367 aaKnown RBP13.74□□□□□ -0.21
TREX1-202ENST00000444177 TENM4Q6N022 2769 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 PRR19A6NJB7 356 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 OR52A4PA6NMU1 304 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 CFAP99D6REC4 459 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 H7C0S8 307 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 PRSS56P0CW18 603 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 BRAFP15056 766 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 TCP1P17987 556 aaKnown RBP13.73□□□□□ -0.21
TREX1-202ENST00000444177 XRCC1P18887 633 aaPredicted RBP13.73□□□□□ -0.21
TREX1-202ENST00000444177 SLC19A1P41440 591 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 RAB15P59190 212 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 CYP4F2P78329 520 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 DMPKQ09013 629 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 NFE2L1Q14494 772 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 KCTD19Q17RG1 926 aaPredicted RBP13.73□□□□□ -0.21
TREX1-202ENST00000444177 BCL7AQ4VC05 210 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 PAPD7Q5XG87 772 aaKnown RBP13.73□□□□□ -0.21
TREX1-202ENST00000444177 ANKS6Q68DC2 871 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 TAS2R42Q7RTR8 314 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 PRELID2Q8N945 189 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 CXorf40BQ96DE9 158 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 MS4A14Q96JA4 679 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 ZNF514Q96K75 400 aaPredicted RBP13.73□□□□□ -0.21
TREX1-202ENST00000444177 OSBPL9Q96SU4 736 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 EPB41L1Q9H4G0 881 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 POT1Q9NUX5 634 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 SMARCAL1Q9NZC9 954 aa13.73□□□□□ -0.21
TREX1-202ENST00000444177 ZNF624Q9P2J8 865 aaPredicted RBP13.73□□□□□ -0.21
TREX1-202ENST00000444177 BOD1L1Q8NFC6 3051 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 HEATR9A2RTY3 570 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 MROH6A6NGR9 719 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 LILRA5A6NI73 299 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 AGAP14A8MT82 685 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 KCNJ13O60928 360 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms