RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 MFSD11O43934 449 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 OLR1P78380 273 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 NXNL2Q5VZ03 156 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 ANKS6Q68DC2 871 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 COPS4Q9BT78 406 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 TTLL2Q9BWV7 592 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 MMP28Q9H239 520 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 REEP1Q9H902 201 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 RGS18Q9NS28 235 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 CNTNAP4Q9C0A0 1308 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 ZCWPW2A0A1B0GU75 182 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 YDJCA8MPS7 323 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 CD72P21854 359 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 RPS3P23396 243 aaKnown RBP eCLIP4.96□□□□□ -1.62
HERC1-201ENST00000443617 HTR1EP28566 365 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 UNC50Q53HI1 259 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 ABHD15Q6UXT9 468 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 DEPDC4Q8N2C3 294 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 KIAA1958Q8N8K9 716 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 PAPD5Q8NDF8 572 aaKnown RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 B3GALT6Q96L58 329 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 MBOAT4Q96T53 435 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 CCDC32Q9BV29 185 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 SNTG1Q9NSN8 517 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 MAP10Q9P2G4 905 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 NRXN3Q9Y4C0 1643 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 hCG_2039718K7EN88 272 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 ZNF780AO75290 641 aaPredicted RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 KCNK2O95069 426 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 GEMP55040 296 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 TSNQ15631 228 aaKnown RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 PLET1Q6UQ28 207 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 AGMOQ6ZNB7 445 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 HDDC2Q7Z4H3 204 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 KIF18BQ86Y91 864 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 RIMKLAQ8IXN7 391 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 LRRC17Q8N6Y2 441 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 OR10A6Q8NH74 314 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 FKBP10Q96AY3 582 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 NGLY1Q96IV0 654 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 TMEM74Q96NL1 305 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 C1QTNF1Q9BXJ1 281 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 SNX6Q9UNH7 406 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 HOXC6P09630 235 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 POLR2CP19387 275 aaPredicted RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 MTPNP58546 118 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 FAM214AQ32MH5 1076 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 YIF1BQ5BJH7 314 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 COMMD7Q86VX2 200 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 BEX2Q9BXY8 128 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 TNKS2Q9H2K2 1166 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 TM9SF3Q9HD45 589 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 MRPL39Q9NYK5 338 aaKnown RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 NUP50Q9UKX7 468 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 AFDNP55196 1824 aaKnown RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 CDK2AP1O14519 115 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 SLC16A6O15403 523 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 HOXB8P17481 243 aaPredicted RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 GGT1P19440 569 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 BRMS1LQ5PSV4 323 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 HDHD2Q9H0R4 259 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 TLR9Q9NR96 1032 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 KRT84Q9NSB2 600 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 SPASTQ9UBP0 616 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 AASSQ9UDR5 926 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 INVSQ9Y283 1065 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 TIAM2Q8IVF5 1701 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 OR6C70A6NIJ9 312 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 RHOBTB1O94844 696 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 ITGB1P05556 798 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 LCKP06239 509 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 PSKH1P11801 424 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 NPR1P16066 1061 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 AKT1P31749 480 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 CATSPEREQ5SY80 951 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 SULT1C3Q6IMI6 304 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 PMEPA1Q969W9 287 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 ST6GAL2Q96JF0 529 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 MAGEB10Q96LZ2 347 aaPredicted RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 COL21A1Q96P44 957 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 RACGAP1Q9H0H5 632 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 DBNDD1Q9H9R9 158 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 ERVK13-1Q9NX77 482 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 GIMAP2Q9UG22 337 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 NDUFS3O75489 264 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 ADRA1BP35368 520 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 GALK2Q01415 458 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 SYT6Q5T7P8 510 aaPredicted RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 PXDC1Q5TGL8 231 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 EIF3MQ7L2H7 374 aaKnown RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 SH3BP5LQ7L8J4 393 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 GALNT7Q86SF2 657 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 PHC2Q8IXK0 858 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 STAG3L4Q8TBR4 150 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 ITPAQ9BY32 194 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 UCKL1Q9NWZ5 548 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 M0QYT0 321 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 NFKB1P19838 968 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 GMPSP49915 693 aaPredicted RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 SIK2Q9H0K1 926 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms