RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 PPM1DO15297 605 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 ZNF500O60304 480 aaPredicted RBP12.09□□□□□ -0.47
USP1-203ENST00000442679 ADRB1P08588 477 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 ERVK-10P10266 1014 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 BRAFP15056 766 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 PNLIPP16233 465 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 XRCC1P18887 633 aaPredicted RBP12.09□□□□□ -0.47
USP1-203ENST00000442679 OGNP20774 298 aaKnown RBP12.09□□□□□ -0.47
USP1-203ENST00000442679 HALP42357 657 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 CLCA4Q14CN2 919 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 TYSND1Q2T9J0 566 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 HSP90AA5PQ58FG0 334 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 DNTTIP2Q5QJE6 756 aaKnown RBP12.09□□□□□ -0.47
USP1-203ENST00000442679 RNF187Q5TA31 235 aaPredicted RBP12.09□□□□□ -0.47
USP1-203ENST00000442679 ZNF470Q6ECI4 717 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 PTRHD1Q6GMV3 140 aaKnown RBP12.09□□□□□ -0.47
USP1-203ENST00000442679 ZNF449Q6P9G9 518 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 ZDHHC24Q6UX98 284 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 UNC5AQ6ZN44 842 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 KCNMB4Q86W47 210 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 LRRC6Q86X45 466 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 CILP2Q8IUL8 1156 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 TRIM48Q8IWZ4 208 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 LMNTD2Q8IXW0 634 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 ZBED8Q8IZ13 594 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 FBXO36Q8NEA4 188 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 FBXO25Q8TCJ0 367 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 CALML6Q8TD86 181 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 SEC14L1Q92503 715 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 WDR83Q9BRX9 315 aaKnown RBP12.09□□□□□ -0.47
USP1-203ENST00000442679 TSSK1BQ9BXA7 367 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 WWP1Q9H0M0 922 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 P2RY12Q9H244 342 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 STN1Q9H668 368 aaKnown RBP12.09□□□□□ -0.47
USP1-203ENST00000442679 PLAC1Q9HBJ0 212 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 EPB41L5Q9HCM4 733 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 SAYSD1Q9NPB0 183 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 IARS2Q9NSE4 1012 aaKnown RBP12.09□□□□□ -0.47
USP1-203ENST00000442679 CPNE7Q9UBL6 633 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 WDR37Q9Y2I8 494 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 PLXNB3Q9ULL4 1909 aa12.09□□□□□ -0.47
USP1-203ENST00000442679 MED19A0JLT2 244 aaPredicted RBP12.08□□□□□ -0.48
USP1-203ENST00000442679 OR52A4PA6NMU1 304 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 ESPNB1AK53 854 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 EIF3HO15372 352 aaKnown RBP eCLIP12.08□□□□□ -0.48
USP1-203ENST00000442679 ZW10O43264 779 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 HYAL3O43820 417 aaPredicted RBP12.08□□□□□ -0.48
USP1-203ENST00000442679 S1PR4O95977 384 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 TOP3BO95985 862 aaKnown RBP12.08□□□□□ -0.48
USP1-203ENST00000442679 VIPP01282 170 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 ITGB6P18564 788 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 RPS3P23396 243 aaKnown RBP eCLIP12.08□□□□□ -0.48
USP1-203ENST00000442679 ALDH4A1P30038 563 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 FMO4P31512 558 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 SLC19A1P41440 591 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 GPR3P46089 330 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 FASLGP48023 281 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 EIF3BP55884 814 aaKnown RBP12.08□□□□□ -0.48
USP1-203ENST00000442679 CLDN6P56747 220 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 OR1D5P58170 312 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 CCL7P80098 99 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 INSM1Q01101 510 aaPredicted RBP12.08□□□□□ -0.48
USP1-203ENST00000442679 HHEXQ03014 270 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 CTBP1Q13363 440 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 FASTKD3Q14CZ7 662 aaKnown RBP12.08□□□□□ -0.48
USP1-203ENST00000442679 RPE65Q16518 533 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 ZNF658BQ4V348 819 aaPredicted RBP12.08□□□□□ -0.48
USP1-203ENST00000442679 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.08□□□□□ -0.48
USP1-203ENST00000442679 STEAP4Q687X5 459 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 XKR5Q6UX68 686 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 ZNF438Q7Z4V0 828 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 DENND6AQ8IWF6 608 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 LILRA3Q8N6C8 439 aaPredicted RBP12.08□□□□□ -0.48
USP1-203ENST00000442679 AVL9Q8NBF6 648 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 GABPB2Q8TAK5 448 aaPredicted RBP12.08□□□□□ -0.48
USP1-203ENST00000442679 PYROXD1Q8WU10 500 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 ELMO1Q92556 727 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 LPGAT1Q92604 370 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 SH3KBP1Q96B97 665 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 CXorf40BQ96DE9 158 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 SLC38A3Q99624 504 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 FAM167BQ9BTA0 163 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 SYNDIG1Q9H7V2 258 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 COG4Q9H9E3 785 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 SARS2Q9NP81 518 aaKnown RBP12.08□□□□□ -0.48
USP1-203ENST00000442679 PPANQ9NQ55 473 aaKnown RBP12.08□□□□□ -0.48
USP1-203ENST00000442679 FBXO6Q9NRD1 293 aaPredicted RBP12.08□□□□□ -0.48
USP1-203ENST00000442679 FAM114A2Q9NRY5 505 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 INTS10Q9NVR2 710 aaKnown RBP12.08□□□□□ -0.48
USP1-203ENST00000442679 ZNF624Q9P2J8 865 aaPredicted RBP12.08□□□□□ -0.48
USP1-203ENST00000442679 DMGDHQ9UI17 866 aaKnown RBP12.08□□□□□ -0.48
USP1-203ENST00000442679 GNPTGQ9UJJ9 305 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 VPS9D1Q9Y2B5 631 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 CRYL1Q9Y2S2 319 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 PCNX2A6NKB5 2137 aa12.08□□□□□ -0.48
USP1-203ENST00000442679 ARID1BQ8NFD5 2236 aaPredicted RBP12.07□□□□□ -0.48
USP1-203ENST00000442679 IQCF5A8MTL0 148 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 BHMG1C9JSJ3 638 aaPredicted RBP12.07□□□□□ -0.48
USP1-203ENST00000442679 LIN7AO14910 233 aaPredicted RBP12.07□□□□□ -0.48
USP1-203ENST00000442679 CASC3O15234 703 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms