RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 LMNTD2Q8IXW0 634 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 PDIK1LQ8N165 341 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 CLDN19Q8N6F1 224 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 Q8N9G6 341 aaPredicted RBP14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 ZFPM2Q8WW38 1151 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 GATA6Q92908 595 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 ZNF669Q96BR6 464 aaPredicted RBP14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 LRRC39Q96DD0 335 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 STAMBPL1Q96FJ0 436 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 SLC38A3Q99624 504 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 ERP44Q9BS26 406 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 TSSK1BQ9BXA7 367 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 TMEM121BQ9BXQ6 578 aaPredicted RBP14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 NRSN2Q9GZP1 204 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 KCNK4Q9NYG8 393 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 ZNF624Q9P2J8 865 aaPredicted RBP14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 WDR37Q9Y2I8 494 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 KIF26BQ2KJY2 2108 aa14.74□□□□□ -0.05
CSNK1E-210ENST00000442216 IGHV1OR21-1A0A087WYE8 117 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 ZCWPW2A0A1B0GU75 182 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 FAM149AA5PLN7 773 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 PRMT5O14744 637 aaPredicted RBP14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 LIN7AO14910 233 aaPredicted RBP14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 RAD51CO43502 376 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 CSO75390 466 aaKnown RBP14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 CPNE6O95741 557 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 PGAM1P18669 254 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 ALDH4A1P30038 563 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 CCKBRP32239 447 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 CD151P48509 253 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 CLDN6P56747 220 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 OR1D5P58170 312 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 DHX9Q08211 1270 aaKnown RBP14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 C2orf54Q08AI8 447 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 SEPT7Q16181 437 aaKnown RBP14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 TYSND1Q2T9J0 566 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 CES3Q6UWW8 571 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 XKR5Q6UX68 686 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 TMEM26Q6ZUK4 368 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 MICALCLQ6ZW33 695 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 PIM3Q86V86 326 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 TRIM48Q8IWZ4 208 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 CFAP206Q8IYR0 622 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 AGGF1Q8N302 714 aaeCLIP14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 OR10G6Q8NH81 332 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 CALML6Q8TD86 181 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 CXorf40BQ96DE9 158 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 TMEM74Q96NL1 305 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 FCRL3Q96P31 734 aaPredicted RBP14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 EBNA1BP2Q99848 306 aaKnown RBP14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 CARD6Q9BX69 1037 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 RAB17Q9H0T7 212 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 COG4Q9H9E3 785 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 SLC40A1Q9NP59 571 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 WHRNQ9P202 907 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 MARCH4Q9P2E8 410 aaPredicted RBP14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 VPS9D1Q9Y2B5 631 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 MAD1L1Q9Y6D9 718 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 PRSS21Q9Y6M0 314 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 FAM169AQ9Y6X4 670 aa14.73□□□□□ -0.05
CSNK1E-210ENST00000442216 TP73O15350 636 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 OR1I1O60431 355 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 NDUFS3O75489 264 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 SLC35G4P0C7Q5 338 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 CD1CP29017 333 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 RPL21P46778 160 aaKnown RBP14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 ADARP55265 1226 aaKnown RBP14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 ARL4CP56559 192 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 RTP5Q14D33 572 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 RPE65Q16518 533 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 HIF1AQ16665 826 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 LONRF1Q17RB8 773 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 CAPRIN2Q6IMN6 1127 aaKnown RBP14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 NEPROQ6NW34 567 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 KIF18AQ8NI77 898 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 GABPB2Q8TAK5 448 aaPredicted RBP14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 NAT14Q8WUY8 206 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 ZNF592Q92610 1267 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 LIN37Q96GY3 246 aaPredicted RBP14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 TRIM31Q9BZY9 425 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 P2RY12Q9H244 342 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 SYNDIG1Q9H7V2 258 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 DKK4Q9UBT3 224 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 GNPTGQ9UJJ9 305 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 UTP11Q9Y3A2 253 aaKnown RBP14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 ENTPD2Q9Y5L3 495 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 HEBP2Q9Y5Z4 205 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 MRFAP1Q9Y605 127 aa14.72□□□□□ -0.05
CSNK1E-210ENST00000442216 TMEM8BA6NDV4 472 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 OR52A4PA6NMU1 304 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 DUX1O43812 170 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 MTHFD1P11586 935 aaKnown RBP14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 NDUFS1P28331 727 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 PDX1P52945 283 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 INHBCP55103 352 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 ZFP36L1Q07352 338 aaKnown RBP14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 CALCOCO2Q13137 446 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 EIF3IQ13347 325 aaKnown RBP14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 THOC5Q13769 683 aaKnown RBP14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 MAP9Q49MG5 647 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms