RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 RDH11Q8TC12 318 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 HEXDCQ8WVB3 486 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 RAB7BQ96AH8 199 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 ERLEC1Q96DZ1 483 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 COPS8Q99627 209 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 HDAC8Q9BY41 377 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 RSPH9Q9H1X1 276 aaPredicted RBP7.98□□□□□ -1.13
CCDC39-201ENST00000442201 P2RY12Q9H244 342 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 SLCO1B3Q9NPD5 702 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 CD84Q9UIB8 345 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 hCG_2014768A0A024R1R8 64 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 LOC105371267A0A1B0GV96 52 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 H3BMM5 538 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 WISP3O95389 354 aaPredicted RBP7.98□□□□□ -1.13
CCDC39-201ENST00000442201 EGFP01133 1207 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 LYNP07948 512 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 GLULP15104 373 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 ZNF37AP17032 561 aaPredicted RBP7.98□□□□□ -1.13
CCDC39-201ENST00000442201 CHRM3P20309 590 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 CD9P21926 228 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 RPS3P23396 243 aaKnown RBP eCLIP7.98□□□□□ -1.13
CCDC39-201ENST00000442201 ETV3P41162 512 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 DLG1Q12959 904 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 PCLAFQ15004 111 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 CST6Q15828 149 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 TRMT11Q7Z4G4 463 aaKnown RBP7.98□□□□□ -1.13
CCDC39-201ENST00000442201 RAVER1Q8IY67 606 aaKnown RBP7.98□□□□□ -1.13
CCDC39-201ENST00000442201 DTX3LQ8TDB6 740 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 ANKRD49Q8WVL7 239 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 SCAMP4Q969E2 229 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 ABTB1Q969K4 478 aaPredicted RBP7.98□□□□□ -1.13
CCDC39-201ENST00000442201 GRAMD1AQ96CP6 724 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 GPR78Q96P69 363 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 GPR21Q99679 349 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 MRPL57Q9BQC6 102 aaKnown RBP7.98□□□□□ -1.13
CCDC39-201ENST00000442201 WRAP53Q9BUR4 548 aaKnown RBP7.98□□□□□ -1.13
CCDC39-201ENST00000442201 LRMDAQ9H2I8 198 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 IGSF5Q9NSI5 407 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 ZDHHC3Q9NYG2 299 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 XPR1Q9UBH6 696 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 TRMT6Q9UJA5 497 aaKnown RBP7.98□□□□□ -1.13
CCDC39-201ENST00000442201 GNPTGQ9UJJ9 305 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 MED16Q9Y2X0 877 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 XIRP2A4UGR9 3374 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 TK2O00142 265 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 PLK4O00444 970 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 WNT9AO14904 365 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 SNX3O60493 162 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 EDF1O60869 148 aaKnown RBP7.98□□□□□ -1.13
CCDC39-201ENST00000442201 NIPSNAP2O75323 286 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 RBP1P09455 135 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 MYL2P10916 166 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 P2RY2P41231 377 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 NSG1P42857 185 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 TIAL1Q01085 375 aaKnown RBP eCLIP7.98□□□□□ -1.13
CCDC39-201ENST00000442201 CNTN1Q12860 1018 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 DCTN2Q13561 401 aaKnown RBP7.98□□□□□ -1.13
CCDC39-201ENST00000442201 NDUFA5Q16718 116 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 MUM1Q2TAK8 710 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 LEXMQ3ZCV2 418 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 CTSL3PQ5NE16 218 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 UGT3A1Q6NUS8 523 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 NEK10Q6ZWH5 1172 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 TECPR1Q7Z6L1 1165 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 C10orf107Q8IVU9 208 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 MSANTD3Q96H12 275 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 ELAC2Q9BQ52 826 aaKnown RBP7.98□□□□□ -1.13
CCDC39-201ENST00000442201 ZSCAN5AQ9BUG6 496 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 RIOK2Q9BVS4 552 aaKnown RBP7.98□□□□□ -1.13
CCDC39-201ENST00000442201 BOCQ9BWV1 1114 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 TSSK1BQ9BXA7 367 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 UNKQ9C0B0 810 aaKnown RBP7.98□□□□□ -1.13
CCDC39-201ENST00000442201 NOX1Q9Y5S8 564 aa7.98□□□□□ -1.13
CCDC39-201ENST00000442201 OAS3Q9Y6K5 1087 aaKnown RBP7.98□□□□□ -1.13
CCDC39-201ENST00000442201 KIAA1549LQ6ZVL6 1849 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 DYTNA2CJ06 578 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 SPINT1O43278 529 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 ADH1BP00325 375 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 C5AR1P21730 350 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 CA5AP35218 305 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 BST1Q10588 318 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 STX3Q13277 289 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 E2F2Q14209 437 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 ACAP2Q15057 778 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 ZNF776Q68DI1 518 aaPredicted RBP7.97□□□□□ -1.13
CCDC39-201ENST00000442201 PTCRAQ6ISU1 281 aaPredicted RBP7.97□□□□□ -1.13
CCDC39-201ENST00000442201 GPR153Q6NV75 609 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 PAQR3Q6TCH7 311 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 TMEM207Q6UWW9 146 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 CACUL1Q86Y37 369 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 NRSN1Q8IZ57 195 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 TRAM1L1Q8N609 369 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 CLDN19Q8N6F1 224 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 IL17RCQ8NAC3 791 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 OR2T3Q8NH03 318 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 STARD8Q92502 1023 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 AP2M1Q96CW1 435 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 GABRG3Q99928 467 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 DCLRE1BQ9H816 532 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 FBRSQ9HAH7 460 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms