RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 CRLS1Q9UJA2 301 aa18.53■□□□□ 0.56
HMGB3P22-201ENST00000442010 PSMD13Q9UNM6 376 aa18.53■□□□□ 0.56
HMGB3P22-201ENST00000442010 PCDHB11Q9Y5F2 797 aa18.53■□□□□ 0.56
HMGB3P22-201ENST00000442010 PIEZO2Q9H5I5 2752 aa18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 IGLV3-16A0A075B6K0 115 aa18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 KLHL33A6NCF5 533 aa18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 TOX3O15405 576 aaPredicted RBP18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 CAPN5O15484 640 aaPredicted RBP18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 PSMD3O43242 534 aa18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 AMD1P17707 334 aa18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 ITGALP20701 1170 aa18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 MC4RP32245 332 aa18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 HALP42357 657 aa18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 LEPRP48357 1165 aaKnown RBP18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 PRLHRP49683 370 aa18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 CDKN1CP49918 316 aaPredicted RBP18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 SIX1Q15475 284 aaPredicted RBP18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 SEL1L2Q5TEA6 688 aa18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 TEFMQ96QE5 360 aaKnown RBP18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 INSM2Q96T92 566 aaPredicted RBP18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 APMAPQ9HDC9 416 aa18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 EPHA6Q9UF33 1036 aa18.52■□□□□ 0.56
HMGB3P22-201ENST00000442010 MROH6A6NGR9 719 aa18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 EIF4E1BA6NMX2 242 aaKnown RBP18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 PBLDP30039 288 aaPredicted RBP18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 GPR33Q49SQ1 333 aa18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 ZNF658BQ4V348 819 aaPredicted RBP18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 CEACAM20Q6UY09 585 aa18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 PRSS42Q7Z5A4 293 aa18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 LRRC8AQ8IWT6 810 aa18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 LILRA3Q8N6C8 439 aaPredicted RBP18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 STYXQ8WUJ0 223 aa18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 JPH3Q8WXH2 748 aaPredicted RBP18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 CDKN2AIPNLQ96HQ2 116 aa18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 TGM7Q96PF1 710 aa18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 CTRCQ99895 268 aa18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 ZNF768Q9H5H4 540 aaKnown RBP18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 PIH1D1Q9NWS0 290 aaKnown RBP18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 SEMA5BQ9P283 1151 aa18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 PILRAQ9UKJ1 303 aa18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 ACSL5Q9ULC5 683 aa18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 PCDHGA4Q9Y5G9 962 aa18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 CFAP46Q8IYW2 2715 aa18.51■□□□□ 0.55
HMGB3P22-201ENST00000442010 ERI2A8K979 691 aaKnown RBP18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 SUN1O94901 812 aa18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 PRSS56P0CW18 603 aa18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 MTHFD1P11586 935 aaKnown RBP18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 ATP1B2P14415 290 aaPredicted RBP18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 ACRV1P26436 265 aa18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 POU6F1Q14863 301 aa18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 TAF1BQ53T94 588 aaPredicted RBP18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 CAPRIN2Q6IMN6 1127 aaKnown RBP18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 TAB3Q8N5C8 712 aaPredicted RBP18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 SPDYE1Q8NFV5 336 aaPredicted RBP18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 HEXDCQ8WVB3 486 aa18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 C1orf54Q8WWF1 131 aa18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 COPS8Q99627 209 aa18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 ZPBPQ9BS86 351 aa18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 SEMA4CQ9C0C4 833 aa18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 WWP1Q9H0M0 922 aa18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 ETNK1Q9HBU6 452 aa18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 WDR70Q9NW82 654 aa18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 ZDHHC3Q9NYG2 299 aa18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 TMEM184BQ9Y519 407 aaPredicted RBP18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 SPTBP11277 2137 aa18.5■□□□□ 0.55
HMGB3P22-201ENST00000442010 C17orf113A0A1B0GUU1 675 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 KIF1CO43896 1103 aaKnown RBP18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 RAD1O60671 282 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 RALBP11234 206 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 ATP1A2P50993 1020 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 PPP1CAP62136 330 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 CCZ1BP86790 482 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 CCZ1P86791 482 aaPredicted RBP18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 RPS6KA1Q15418 735 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 PRUNE1Q86TP1 453 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 LINC00523Q86TU6 105 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 SERPINA9Q86WD7 417 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 PIANPQ8IYJ0 282 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 ZNF843Q8N446 348 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 GLIS1Q8NBF1 620 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 OR52K1Q8NGK4 314 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 ZFPM2Q8WW38 1151 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 KLHL6Q8WZ60 621 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 DCUN1D1Q96GG9 259 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 RMDN2Q96LZ7 410 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 LZTFL1Q9NQ48 299 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 CFAP20Q9Y6A4 193 aaKnown RBP18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 BSNQ9UPA5 3926 aa18.49■□□□□ 0.55
HMGB3P22-201ENST00000442010 DLGAP3O95886 979 aa18.48■□□□□ 0.55
HMGB3P22-201ENST00000442010 CCDC175P0C221 793 aa18.48■□□□□ 0.55
HMGB3P22-201ENST00000442010 ETS1P14921 441 aa18.48■□□□□ 0.55
HMGB3P22-201ENST00000442010 FDFT1P37268 417 aa18.48■□□□□ 0.55
HMGB3P22-201ENST00000442010 SEPHS1P49903 392 aa18.48■□□□□ 0.55
HMGB3P22-201ENST00000442010 LINC00303Q3SY05 128 aa18.48■□□□□ 0.55
HMGB3P22-201ENST00000442010 ZRANB3Q5FWF4 1079 aa18.48■□□□□ 0.55
HMGB3P22-201ENST00000442010 DUS1LQ6P1R4 473 aaKnown RBP18.48■□□□□ 0.55
HMGB3P22-201ENST00000442010 TIPARPQ7Z3E1 657 aaKnown RBP18.48■□□□□ 0.55
HMGB3P22-201ENST00000442010 CFAP206Q8IYR0 622 aa18.48■□□□□ 0.55
HMGB3P22-201ENST00000442010 CACNA2D3Q8IZS8 1091 aa18.48■□□□□ 0.55
HMGB3P22-201ENST00000442010 HM13Q8TCT9 377 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms