RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 G3V2T6 193 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 H3BMM5 538 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 VPS4BO75351 444 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 B3GAT3O94766 335 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 CDK14O94921 469 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 EN2P19622 333 aaPredicted RBP11.75□□□□□ -0.53
LTBR-203ENST00000441074 CASP3P42574 277 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 KCNC1P48547 511 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 NDUFV1P49821 464 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 OR4D2P58180 307 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 DAOAP59103 153 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 ISL1P61371 349 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 EMX2Q04743 252 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 RCAN2Q14206 197 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 SELPLGQ14242 412 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 ZNF181Q2M3W8 571 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 FAM98BQ52LJ0 330 aaKnown RBP11.75□□□□□ -0.53
LTBR-203ENST00000441074 CATSPEREQ5SY80 951 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 KANK2Q63ZY3 851 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 DENND5AQ6IQ26 1287 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 TRAF7Q6Q0C0 670 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 CLEC20AQ6ZU45 233 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 HTRA1Q92743 480 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 RORBQ92753 470 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 DPF3Q92784 378 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 TUBGCP3Q96CW5 907 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 SENP8Q96LD8 212 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 TMEM74Q96NL1 305 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 ZNF300Q96RE9 604 aaPredicted RBP11.75□□□□□ -0.53
LTBR-203ENST00000441074 CCDC90BQ9GZT6 254 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 CNGB3Q9NQW8 809 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 TREX1Q9NSU2 369 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 HCSTQ9UBK5 93 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 LEF1Q9UJU2 399 aaPredicted RBP11.75□□□□□ -0.53
LTBR-203ENST00000441074 USP22Q9UPT9 525 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 A0A0U1RQF3 1178 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 MYBPHLA2RUH7 354 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 SAGE2PA6NJ88 616 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 CCDC85CA6NKD9 419 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 NOTOA8MTQ0 251 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 GUCY1B2O75343 617 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 ANXA9O76027 345 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 LRIG2O94898 1065 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 KCNK2O95069 426 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 NPPAP01160 153 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 ENO2P09104 434 aaPredicted RBP11.75□□□□□ -0.53
LTBR-203ENST00000441074 BMP1P13497 986 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 PIGAP37287 484 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 MTHFRP42898 656 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 CDH13P55290 713 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 VBP1P61758 197 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 CHRNB3Q05901 458 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 CARTPTQ16568 116 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 TIGD5Q53EQ6 642 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 SMUG1Q53HV7 270 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 TUBA3EQ6PEY2 450 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 TTC23LQ6PF05 361 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 PAGE2Q7Z2X7 111 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 SPATA19Q7Z5L4 167 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 RBM23Q86U06 439 aaKnown RBP11.75□□□□□ -0.53
LTBR-203ENST00000441074 P2RY8Q86VZ1 359 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 ZNF280BQ86YH2 543 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 SPNS2Q8IVW8 549 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 SVOPQ8N4V2 548 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 TMEM199Q8N511 208 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 ANKRD49Q8WVL7 239 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 ZNF566Q969W8 418 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 MED10Q9BTT4 135 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 LRRC3Q9BY71 257 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 ASPSCR1Q9BZE9 553 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 CEP44Q9C0F1 390 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 SLIRPQ9GZT3 109 aaKnown RBP11.75□□□□□ -0.53
LTBR-203ENST00000441074 ALG9Q9H6U8 611 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 SMURF2Q9HAU4 748 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 MID1IP1Q9NPA3 183 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 LTB4R2Q9NPC1 389 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 POLG2Q9UHN1 485 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 TIMM22Q9Y584 194 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 SPO11Q9Y5K1 396 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 SLC26A3P40879 764 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 ZFP36L2P47974 494 aaKnown RBP11.74□□□□□ -0.53
LTBR-203ENST00000441074 LSM3P62310 102 aaKnown RBP11.74□□□□□ -0.53
LTBR-203ENST00000441074 PPP2R2BQ00005 443 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 KCNAB2Q13303 367 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 E2F2Q14209 437 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 UPP1Q16831 310 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 SULT1C3Q6IMI6 304 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 PAQR9Q6ZVX9 377 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 TAS2R42Q7RTR8 314 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 ISCA2Q86U28 154 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 OR7G1Q8NGA0 311 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 SPATA22Q8NHS9 363 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 GABPB2Q8TAK5 448 aaPredicted RBP11.74□□□□□ -0.53
LTBR-203ENST00000441074 LINC01599Q8WXQ3 324 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 TP53INP1Q96A56 240 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 TMEM209Q96SK2 561 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 ULBP1Q9BZM6 244 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 OR2B2Q9GZK3 357 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 TUBB1Q9H4B7 451 aa11.74□□□□□ -0.53
LTBR-203ENST00000441074 ABCB10Q9NRK6 738 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms