RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 HOXB3P14651 431 aaPredicted RBP17.37■□□□□ 0.37
CCDC188-201ENST00000439765 FOXN2P32314 431 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 ABCG1P45844 678 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 NPY2RP49146 381 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 ARL4CP56559 192 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 HIF1AQ16665 826 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 GPR33Q49SQ1 333 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 TMEM220Q6QAJ8 160 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 AFTPHQ6ULP2 937 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 SERPINA9Q86WD7 417 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 C17orf82Q86X59 251 aaPredicted RBP17.37■□□□□ 0.37
CCDC188-201ENST00000439765 ZNF761Q86XN6 746 aaPredicted RBP17.37■□□□□ 0.37
CCDC188-201ENST00000439765 PDIK1LQ8N165 341 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 OR6C4Q8NGE1 309 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 TSPYL1Q9H0U9 437 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 PCDHB1Q9Y5F3 818 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 TRBV5-4A0A0C4DH59 114 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 A6NCN8 305 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 RHPN2P1A8MT19 583 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 PDZK1P1A8MUH7 402 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 GOT2P00505 430 aaKnown RBP17.37■□□□□ 0.37
CCDC188-201ENST00000439765 VCLP18206 1134 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 PSMA3P25788 255 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 RPL10P27635 214 aaKnown RBP17.37■□□□□ 0.37
CCDC188-201ENST00000439765 PRAMEP78395 509 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 ACVR1Q04771 509 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 DBN1Q16643 649 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 MSS51Q4VC12 460 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 PCID2Q5JVF3 399 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 NLRP9Q7RTR0 991 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 SPRED1Q7Z699 444 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 AMZ2Q86W34 360 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 GSPT2Q8IYD1 628 aaKnown RBP17.37■□□□□ 0.37
CCDC188-201ENST00000439765 MPP5Q8N3R9 675 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 SFRP1Q8N474 314 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 OR6P1Q8NGX9 317 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 FGF11Q92914 225 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 DCBLD2Q96PD2 775 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 PHACTR1Q9C0D0 580 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 ZDHHC3Q9NYG2 299 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 CFAP99D6REC4 459 aa17.36■□□□□ 0.37
CCDC188-201ENST00000439765 E7ESA3 106 aa17.36■□□□□ 0.37
CCDC188-201ENST00000439765 EIF3HO15372 352 aaKnown RBP eCLIP17.36■□□□□ 0.37
CCDC188-201ENST00000439765 SGTAO43765 313 aa17.36■□□□□ 0.37
CCDC188-201ENST00000439765 CSO75390 466 aaKnown RBP17.36■□□□□ 0.37
CCDC188-201ENST00000439765 POP7O75817 140 aaKnown RBP17.36■□□□□ 0.37
CCDC188-201ENST00000439765 DXOO77932 396 aaKnown RBP17.36■□□□□ 0.37
CCDC188-201ENST00000439765 NMBRP28336 390 aa17.36■□□□□ 0.37
CCDC188-201ENST00000439765 ALDH4A1P30038 563 aa17.36■□□□□ 0.37
CCDC188-201ENST00000439765 CCL7P80098 99 aa17.36■□□□□ 0.37
CCDC188-201ENST00000439765 DHX9Q08211 1270 aaKnown RBP17.36■□□□□ 0.37
CCDC188-201ENST00000439765 SPIDRQ14159 915 aa17.36■□□□□ 0.37
CCDC188-201ENST00000439765 NFE2L1Q14494 772 aa17.36■□□□□ 0.37
CCDC188-201ENST00000439765 TBC1D25Q3MII6 688 aa17.36■□□□□ 0.37
CCDC188-201ENST00000439765 CASC4Q6P4E1 433 aa17.36■□□□□ 0.37
CCDC188-201ENST00000439765 FAM83HQ6ZRV2 1179 aaPredicted RBP17.36■□□□□ 0.37
CCDC188-201ENST00000439765 CEP128Q6ZU80 1094 aa17.36■□□□□ 0.37
CCDC188-201ENST00000439765 CENPUQ71F23 418 aa17.36■□□□□ 0.37
CCDC188-201ENST00000439765 SIGLEC10Q96LC7 697 aa17.36■□□□□ 0.37
CCDC188-201ENST00000439765 RIMKLBQ9ULI2 386 aa17.36■□□□□ 0.37
CCDC188-201ENST00000439765 IGLV3-16A0A075B6K0 115 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 A0A1W2PQM1 296 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 PRR19A6NJB7 356 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 SDR42E2A6NKP2 422 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 PPM1DO15297 605 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 FAM153BP0C7A2 387 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 SLC2A4P14672 509 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 FASLGP48023 281 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 CLCNKAP51800 687 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 HHEXQ03014 270 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 PDIA2Q13087 525 aaKnown RBP17.35■□□□□ 0.37
CCDC188-201ENST00000439765 BBS9Q3SYG4 887 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 FAM153CQ494X1 144 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 BCL7AQ4VC05 210 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 DNAJC21Q5F1R6 531 aaKnown RBP17.35■□□□□ 0.37
CCDC188-201ENST00000439765 IYDQ6PHW0 289 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 CES3Q6UWW8 571 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 RBM44Q6ZP01 1051 aaKnown RBP17.35■□□□□ 0.37
CCDC188-201ENST00000439765 ZNF438Q7Z4V0 828 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 CCDC25Q86WR0 208 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 LSMEM2Q8N112 164 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 AGGF1Q8N302 714 aaeCLIP17.35■□□□□ 0.37
CCDC188-201ENST00000439765 CLDN19Q8N6F1 224 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 PEX13Q92968 403 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.35■□□□□ 0.37
CCDC188-201ENST00000439765 GRAMD1AQ96CP6 724 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 MFSD3Q96ES6 412 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 ZNF514Q96K75 400 aaPredicted RBP17.35■□□□□ 0.37
CCDC188-201ENST00000439765 TRIM56Q9BRZ2 755 aaKnown RBP17.35■□□□□ 0.37
CCDC188-201ENST00000439765 TREX1Q9NSU2 369 aa17.35■□□□□ 0.37
CCDC188-201ENST00000439765 SCHIP1Q9P0W5 487 aaPredicted RBP17.35■□□□□ 0.37
CCDC188-201ENST00000439765 D6RAR5 112 aa17.34■□□□□ 0.37
CCDC188-201ENST00000439765 RRP8O43159 456 aaKnown RBP17.34■□□□□ 0.37
CCDC188-201ENST00000439765 BANF1O75531 89 aa17.34■□□□□ 0.37
CCDC188-201ENST00000439765 ATP1B2P14415 290 aaPredicted RBP17.34■□□□□ 0.37
CCDC188-201ENST00000439765 PNLIPP16233 465 aa17.34■□□□□ 0.37
CCDC188-201ENST00000439765 PRLHRP49683 370 aa17.34■□□□□ 0.37
CCDC188-201ENST00000439765 PDX1P52945 283 aa17.34■□□□□ 0.37
CCDC188-201ENST00000439765 OR1D5P58170 312 aa17.34■□□□□ 0.37
CCDC188-201ENST00000439765 SEMA3AQ14563 771 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms