RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 SLC38A9Q8NBW4 561 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 CPLX3Q8WVH0 158 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 C14orf79Q96F83 325 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 CELF6Q96J87 481 aaKnown RBP10.91□□□□□ -0.66
CSTF3-203ENST00000438862 ZNF599Q96NL3 588 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 NUDCD1Q96RS6 583 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 WDR77Q9BQA1 342 aaPredicted RBP10.91□□□□□ -0.66
CSTF3-203ENST00000438862 RIOK2Q9BVS4 552 aaKnown RBP10.91□□□□□ -0.66
CSTF3-203ENST00000438862 CARD9Q9H257 536 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 OSGEPL1Q9H4B0 414 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 KLC4Q9NSK0 619 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 SCHIP1Q9P0W5 487 aaPredicted RBP10.91□□□□□ -0.66
CSTF3-203ENST00000438862 AJAP1Q9UKB5 411 aaPredicted RBP10.91□□□□□ -0.66
CSTF3-203ENST00000438862 FZD10Q9ULW2 581 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 KCNN4O15554 427 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 NRDCO43847 1150 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 MAN1A2O60476 641 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 PGLSO95336 258 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 CAPN1P07384 714 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 CD99P14209 185 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 TNFAIP3P21580 790 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 ARCN1P48444 511 aaKnown RBP10.9□□□□□ -0.66
CSTF3-203ENST00000438862 TPI1P60174 286 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 NOMO3P69849 1222 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 GPR18Q14330 331 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 SSPNQ14714 243 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 ASIC2Q16515 512 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 DCAF10Q5QP82 559 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 TMTC4Q5T4D3 741 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 ARMC12Q5T9G4 340 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 B3GNTL1Q67FW5 361 aaPredicted RBP10.9□□□□□ -0.66
CSTF3-203ENST00000438862 LCN10Q6JVE6 187 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 PPP1R2P3Q6NXS1 205 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 SCYL2Q6P3W7 929 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 XKRXQ6PP77 449 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 ABRAXAS1Q6UWZ7 409 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 RPTNQ6XPR3 784 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 TMTC1Q8IUR5 882 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 MEIOBQ8N635 442 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 JOSD2Q8TAC2 188 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 PPP4R1Q8TF05 950 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 ZNF501Q96CX3 271 aaPredicted RBP10.9□□□□□ -0.66
CSTF3-203ENST00000438862 TRAPPC9Q96Q05 1148 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 CD180Q99467 661 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 SLX1AQ9BQ83 275 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 DPH2Q9BQC3 489 aaPredicted RBP10.9□□□□□ -0.66
CSTF3-203ENST00000438862 CNOT6Q9ULM6 557 aaKnown RBP10.9□□□□□ -0.66
CSTF3-203ENST00000438862 NOVA2Q9UNW9 492 aaKnown RBP10.9□□□□□ -0.66
CSTF3-203ENST00000438862 PADI2Q9Y2J8 665 aa10.9□□□□□ -0.66
CSTF3-203ENST00000438862 DNHD1Q96M86 4753 aa10.9□□□□□ -0.67
CSTF3-203ENST00000438862 FAM170AA1A519 330 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 FAM221AA4D161 298 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 GPR89AB7ZAQ6 455 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 PEX12O00623 359 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 JRKO75564 520 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 GPR89BP0CG08 455 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 PNMA6AP0CW24 399 aaPredicted RBP10.89□□□□□ -0.67
CSTF3-203ENST00000438862 KRT3P12035 628 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 CTPS1P17812 591 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 GPD1P21695 349 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 MMP8P22894 467 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 KRTAP10-9P60411 292 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 CDR2Q01850 454 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 KLHL30Q0D2K2 578 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 SLC10A7Q0GE19 358 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 TRAF2Q12933 501 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 CDC16Q13042 620 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 PLCL1Q15111 1095 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 PTPRRQ15256 657 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 FAM69BQ5VUD6 431 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 TAF3Q5VWG9 929 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 NAA35Q5VZE5 725 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 TRIM72Q6ZMU5 477 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 CCDC170Q8IYT3 715 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 LINC00528Q8N1L1 170 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 SPC24Q8NBT2 197 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 DNAJB14Q8TBM8 379 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 EPS8L1Q8TE68 723 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 PIH1D2Q8WWB5 315 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 CXorf40BQ96DE9 158 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 CLIP3Q96DZ5 547 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 MAP3K3Q99759 626 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 DHRS4Q9BTZ2 278 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 NOD2Q9HC29 1040 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 ZBTB20Q9HC78 741 aaPredicted RBP10.89□□□□□ -0.67
CSTF3-203ENST00000438862 DNPEPQ9ULA0 475 aa10.89□□□□□ -0.67
CSTF3-203ENST00000438862 UBA6A0AVT1 1052 aaPredicted RBP10.88□□□□□ -0.67
CSTF3-203ENST00000438862 TLCD2A6NGC4 264 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 PDZK1P1A8MUH7 402 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 DFFAO00273 331 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 MTA2O94776 668 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 CD63P08962 238 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 OTX2P32243 289 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 RORAP35398 523 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 STC1P52823 247 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 OTUD4Q01804 1114 aaKnown RBP10.88□□□□□ -0.67
CSTF3-203ENST00000438862 ADCY2Q08462 1091 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 NCF4Q15080 339 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 GPR19Q15760 415 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 AGAP9Q5VTM2 703 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms