RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 LIG4P49917 911 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 FUT6P51993 359 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 IFI35P80217 286 aaPredicted RBP3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 NUCB1Q02818 461 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 PRPF4BQ13523 1007 aaKnown RBP3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 GRAPQ13588 217 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 TOMM20Q15388 145 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 ZNF672Q499Z4 452 aaPredicted RBP3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 RAB6CQ53S08 254 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 FAM133BQ5BKY9 247 aaKnown RBP3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 PACS1Q6VY07 963 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 GDPD4Q6W3E5 623 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 C18orf65Q6ZTR6 163 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 FOXL2NBQ6ZUU3 175 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 ATG9AQ7Z3C6 839 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 HAUS6Q7Z4H7 955 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 LDB1Q86U70 411 aaPredicted RBP3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 SCML4Q8N228 414 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 PPFIBP2Q8ND30 876 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 PAPD5Q8NDF8 572 aaKnown RBP3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 TSPAN14Q8NG11 270 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 OR52I2Q8NH67 350 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 TBC1D16Q8TBP0 767 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 SMPDL3BQ92485 455 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 SCRN2Q96FV2 425 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 GCNAQ96QF7 691 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 SLC22A12Q96S37 553 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 CDRT15Q96T59 188 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 POLR3CQ9BUI4 534 aaPredicted RBP3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 APOL6Q9BWW8 343 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 RAB6CQ9H0N0 254 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 CSTL1Q9H114 145 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 FAM118AQ9NWS6 357 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 B3GALT5Q9Y2C3 310 aa3.63□□□□□ -1.83
LSM1P1-201ENST00000438629 LOC102723996A0A087X1L8 192 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 A0A0G2JNG1 304 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 CTAGE9A4FU28 777 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 MAGEB17A8MXT2 336 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 SH2B2O14492 632 aaPredicted RBP3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 SSX4O60224 188 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 GPR137BO60478 399 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 ATP1A1P05023 1023 aaKnown RBP3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 TFAP2AP05549 437 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 CTAGE8P0CG41 777 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 VDRP11473 427 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 AKR1B1P15121 316 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 DVL1P1P54792 670 aaPredicted RBP3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 UBXN2AP68543 259 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 BECN1Q14457 450 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 MELKQ14680 651 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 KIR2DS5Q14953 304 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 ZRSR1Q15695 479 aaKnown RBP3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 DUOXA1Q1HG43 343 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 BMP2KLQ5H9B9 411 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 CCNYL2Q5T2Q4 361 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 GCNT6Q5T4J0 391 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 LCE1AQ5T7P2 110 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 ADALQ6DHV7 355 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 C16orf54Q6UWD8 224 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 C9orf139Q6ZV77 190 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 KCTD8Q6ZWB6 473 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 CTAGE4Q8IX94 777 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 DMBX1Q8NFW5 382 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 OR13A1Q8NGR1 328 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 ZNF622Q969S3 477 aaKnown RBP eCLIP3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 TMCO6Q96DC7 493 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 ERP27Q96DN0 273 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 ERLEC1Q96DZ1 483 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 MTERF3Q96E29 417 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 LINGO1Q96FE5 620 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 EPYCQ99645 322 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 SLF1Q9BQI6 1058 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 RSPH9Q9H1X1 276 aaPredicted RBP3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 SEMA6AQ9H2E6 1030 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 ZNF556Q9HAH1 456 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 HHATLQ9HCP6 504 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 ANKEF1Q9NU02 776 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 KLHL9Q9P2J3 617 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 DDX25Q9UHL0 483 aaKnown RBP3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 NME7Q9Y5B8 376 aa3.62□□□□□ -1.83
LSM1P1-201ENST00000438629 IGLV5-45A0A087WSX0 123 aa3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 hCG_1809904A0A1W2PP81 198 aa3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 A0A1W2PPE2 198 aa3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 A0A1W2PR64 198 aa3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 TCRBV21S2A2A0A5A6 115 aa3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 MED19A0JLT2 244 aaPredicted RBP3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 TMEM178BH3BS89 294 aa3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 PLK4O00444 970 aa3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 CAPN9O14815 690 aa3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 IGHV4-39P01824 125 aa3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 H1F0P07305 194 aaKnown RBP3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 ABCB1P08183 1280 aaPredicted RBP3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 HSP90AB1P08238 724 aaKnown RBP3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 RPL24P83731 157 aaKnown RBP3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 CDK3Q00526 305 aa3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 ILF3Q12906 894 aaKnown RBP eCLIP3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 KLC3Q6P597 504 aa3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 DSG4Q86SJ6 1040 aa3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 NFE4Q86UQ8 179 aa3.61□□□□□ -1.83
LSM1P1-201ENST00000438629 AACSQ86V21 672 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms