RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.82□□□□□ -0.36
CDCA4P4-201ENST00000435216 SPENQ96T58 3664 aaKnown RBP12.82□□□□□ -0.36
CDCA4P4-201ENST00000435216 SOWAHDA6NJG2 315 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 CCL22O00626 93 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 SPAG6O75602 509 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 FURINP09958 794 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 FGF5P12034 268 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 FOLR1P15328 257 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 NELFEP18615 380 aaKnown RBP12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 MSH3P20585 1137 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 PSMB4P28070 264 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 ARCN1P48444 511 aaKnown RBP12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 GEMP55040 296 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 TMPRSS15P98073 1019 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 XRCC4Q13426 336 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 TUBB3Q13509 450 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 MAP7Q14244 749 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 IL11RAQ14626 422 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 SPA17Q15506 151 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 LILRA3Q8N6C8 439 aaPredicted RBP12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 OR13C4Q8NGS5 318 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 DTX3LQ8TDB6 740 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 APOBEC4Q8WW27 367 aaKnown RBP12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 ABHD17AQ96GS6 310 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 INSM2Q96T92 566 aaPredicted RBP12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 MAP3K3Q99759 626 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 EPN3Q9H201 632 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 FAM96AQ9H5X1 160 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 ASB8Q9H765 288 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 AKIRIN1Q9H9L7 192 aaPredicted RBP12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 EPHA6Q9UF33 1036 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 DUSP10Q9Y6W6 482 aa12.81□□□□□ -0.36
CDCA4P4-201ENST00000435216 C2orf81A6NN90 581 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 DDX3YO15523 660 aaKnown RBP12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 KCNN4O15554 427 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 KCNJ13O60928 360 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 ANXA9O76027 345 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 SRP72O76094 671 aaKnown RBP12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 POLBP06746 335 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 EBLN1P0CF75 366 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 MTHFD1P11586 935 aaKnown RBP12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 NR1D1P20393 614 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 LPOP22079 712 aaPredicted RBP12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 CTNNA1P35221 906 aaKnown RBP12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 ADRA1AP35348 466 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 EIF3EP60228 445 aaKnown RBP12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 MC1RQ01726 317 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 SPARCL1Q14515 664 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 TAF1AQ15573 450 aaPredicted RBP12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 LONRF2Q1L5Z9 754 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 ANKRD20A2Q5SQ80 823 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 ANKRD20A1Q5TYW2 823 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 ANKRD20A3Q5VUR7 823 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 METRNLQ641Q3 311 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 ITPRIPL1Q6GPH6 555 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 PWWP2BQ6NUJ5 590 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 FBXO38Q6PIJ6 1188 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 SARM1Q6SZW1 724 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 RANBP10Q6VN20 620 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 PPP1R3BQ86XI6 285 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 SIDT2Q8NBJ9 832 aaKnown RBP12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 CCDC110Q8TBZ0 833 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 C12orf66Q96MD2 445 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 PPM1MQ96MI6 270 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 RUFY1Q96T51 708 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 RAB33BQ9H082 229 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 SMOXQ9NWM0 555 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 TUBD1Q9UJT1 453 aa12.8□□□□□ -0.36
CDCA4P4-201ENST00000435216 FLNCQ14315 2725 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 CDC14CA4D256 554 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 OR6C74A6NCV1 312 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 MGAT4DA6NG13 374 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 K7EM74 188 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 PJA2O43164 708 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 ARHGAP6O43182 974 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 SGTAO43765 313 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 NTRK1P04629 796 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 RBP3P10745 1247 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 CTNNA2P26232 953 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 CYLC1P35663 651 aaPredicted RBP12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 ARL4DP49703 201 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 NAP1L1P55209 391 aaKnown RBP12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 XIAPP98170 497 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 IGFBP7Q16270 282 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 DNTTIP2Q5QJE6 756 aaKnown RBP12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 FAM199XQ6PEV8 388 aaPredicted RBP12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 DARS2Q6PI48 645 aaKnown RBP12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 CDKL3Q8IVW4 592 aaPredicted RBP12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 CCDC170Q8IYT3 715 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 CT55Q8WUE5 264 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 UBXN4Q92575 508 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 SLC41A2Q96JW4 573 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 RMDN2Q96LZ7 410 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 NRTNQ99748 197 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 OSBPL8Q9BZF1 889 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 PDE7BQ9NP56 450 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 HRASLS2Q9NWW9 162 aa12.79□□□□□ -0.36
CDCA4P4-201ENST00000435216 RARRES3Q9UL19 164 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms