RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 FRG1Q14331 258 aaKnown RBP15.36■□□□□ 0.05
SCARF1-203ENST00000434376 SQLEQ14534 574 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 IMPG1Q17R60 797 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 SETMARQ53H47 684 aaPredicted RBP15.36■□□□□ 0.05
SCARF1-203ENST00000434376 XKR5Q6UX68 686 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 BEND5Q7L4P6 421 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 PATL1Q86TB9 770 aaKnown RBP15.36■□□□□ 0.05
SCARF1-203ENST00000434376 DHFR2Q86XF0 187 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 BIRC8Q96P09 236 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 IPPKQ9H8X2 491 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 TBC1D30Q9Y2I9 924 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 C7orf72A4D263 438 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 S100BP04271 92 aaPredicted RBP15.36■□□□□ 0.05
SCARF1-203ENST00000434376 ATP6V1B2P21281 511 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 LMAN2Q12907 356 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 NUMA1Q14980 2115 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 TAF1AQ15573 450 aaPredicted RBP15.36■□□□□ 0.05
SCARF1-203ENST00000434376 CHST14Q8NCH0 376 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 OR2T11Q8NH01 316 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 VPS50Q96JG6 964 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 ZFYVE19Q96K21 471 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 SLC25A23Q9BV35 468 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 NLE1Q9NVX2 485 aaPredicted RBP15.36■□□□□ 0.05
SCARF1-203ENST00000434376 RIMS3Q9UJD0 308 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 MYRFQ9Y2G1 1151 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 CEPT1Q9Y6K0 416 aa15.36■□□□□ 0.05
SCARF1-203ENST00000434376 ILVBLA1L0T0 632 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 PRR23AA6NEV1 266 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 PLK4O00444 970 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 TRIM38O00635 465 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 PRMT5O14744 637 aaPredicted RBP15.35■□□□□ 0.05
SCARF1-203ENST00000434376 SYN1P17600 705 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 RING1Q06587 406 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 LCP2Q13094 533 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 GRAMD4Q6IC98 578 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 TTC33Q6PID6 262 aaPredicted RBP15.35■□□□□ 0.05
SCARF1-203ENST00000434376 GPRIN3Q6ZVF9 776 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 GPR141Q7Z602 305 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 SLAIN1Q8ND83 568 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 ADCY4Q8NFM4 1077 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 CD200R1Q8TD46 325 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 PBXIP1Q96AQ6 731 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 THUMPD3Q9BV44 507 aaKnown RBP15.35■□□□□ 0.05
SCARF1-203ENST00000434376 ZNF225Q9UK10 706 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 NME4O00746 187 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 TGM5O43548 720 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 EEF1B2P24534 225 aaKnown RBP15.35■□□□□ 0.05
SCARF1-203ENST00000434376 OXTRP30559 389 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 ERVPABLB-1P60509 514 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 TRIM25Q14258 630 aaKnown RBP15.35■□□□□ 0.05
SCARF1-203ENST00000434376 NEDD8Q15843 81 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 DGKKQ5KSL6 1271 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 GPR107Q5VW38 600 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 SLC8B1Q6J4K2 584 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 SERPINA13PQ6UXR4 307 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 ZSWIM9Q86XI8 627 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 SCML4Q8N228 414 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 TIMMDC1Q9NPL8 285 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 LSM7Q9UK45 103 aaKnown RBP15.35■□□□□ 0.05
SCARF1-203ENST00000434376 CDC14AQ9UNH5 594 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 WNT6Q9Y6F9 365 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 IGLV3-27P01718 113 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 ATP5BP06576 529 aaKnown RBP15.35■□□□□ 0.05
SCARF1-203ENST00000434376 KPNA1P52294 538 aaPredicted RBP15.35■□□□□ 0.05
SCARF1-203ENST00000434376 HK2P52789 917 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 LARP4Q71RC2 724 aaKnown RBP eCLIP15.35■□□□□ 0.05
SCARF1-203ENST00000434376 RNF145Q96MT1 663 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 TSSK3Q96PN8 268 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 TRIB3Q96RU7 358 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 MAGED1Q9Y5V3 778 aaPredicted RBP15.35■□□□□ 0.05
SCARF1-203ENST00000434376 U3KQV3 271 aa15.35■□□□□ 0.05
SCARF1-203ENST00000434376 NPIPB15A6NHN6 443 aaPredicted RBP15.34■□□□□ 0.05
SCARF1-203ENST00000434376 HOXA2O43364 376 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 G6PDP11413 515 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 YAP1P46937 504 aaKnown RBP15.34■□□□□ 0.05
SCARF1-203ENST00000434376 TTPAP49638 278 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 PLCL1Q15111 1095 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 GALNT10Q86SR1 603 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 DDX53Q86TM3 631 aaKnown RBP15.34■□□□□ 0.05
SCARF1-203ENST00000434376 RBM12BQ8IXT5 1001 aaKnown RBP15.34■□□□□ 0.05
SCARF1-203ENST00000434376 OR4F6Q8NGB9 312 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 FBXO30Q8TB52 745 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 FIG4Q92562 907 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 NCLNQ969V3 563 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.34■□□□□ 0.05
SCARF1-203ENST00000434376 PPP1R2P1Q96PQ5 205 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 CWH43Q9H720 699 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 IL26Q9NPH9 171 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 ZNF510Q9Y2H8 683 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 CCDC154A6NI56 674 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 HIDE1A8MVS5 230 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 HTR7P34969 479 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 ZFP1Q6P2D0 407 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 PCYOX1LQ8NBM8 494 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 PNPT1Q8TCS8 783 aaKnown RBP15.34■□□□□ 0.05
SCARF1-203ENST00000434376 MRM3Q9HC36 420 aaKnown RBP15.34■□□□□ 0.05
SCARF1-203ENST00000434376 ARL15Q9NXU5 204 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 SELENONQ9NZV5 590 aa15.34■□□□□ 0.05
SCARF1-203ENST00000434376 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.34■□□□□ 0.05
SCARF1-203ENST00000434376 RNF11Q9Y3C5 154 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms