RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 ABRAXAS1Q6UWZ7 409 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 GALNT7Q86SF2 657 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 AMZ2Q86W34 360 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 KCNMB4Q86W47 210 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 KYQ8NBH2 561 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 C2CD4AQ8NCU7 369 aaPredicted RBP12.2□□□□□ -0.46
USP40-205ENST00000430158 FAM46DQ8NEK8 389 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 OR2L2Q8NH16 312 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 PYROXD1Q8WU10 500 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 PATE1Q8WXA2 126 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 IFT81Q8WYA0 676 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.2□□□□□ -0.46
USP40-205ENST00000430158 CFAP36Q96G28 342 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 C9orf72Q96LT7 481 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 TTC25Q96NG3 672 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 CDC6Q99741 560 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 CCM2Q9BSQ5 444 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 TXLNGYQ9BZA5 131 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 ANKZF1Q9H8Y5 726 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 IARS2Q9NSE4 1012 aaKnown RBP12.2□□□□□ -0.46
USP40-205ENST00000430158 SLC17A6Q9P2U8 582 aa12.2□□□□□ -0.46
USP40-205ENST00000430158 KIF26BQ2KJY2 2108 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 DCDC2BA2VCK2 349 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 KLHL33A6NCF5 533 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 TNFSF14O43557 240 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 KCNK5O95279 499 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 LDOC1O95751 146 aaPredicted RBP12.19□□□□□ -0.46
USP40-205ENST00000430158 GSTA2P09210 222 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 MYBL2P10244 700 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 CEACAM1P13688 526 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 ACP1P24666 158 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 MPP1Q00013 466 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 HLTFQ14527 1009 aaKnown RBP eCLIP12.19□□□□□ -0.46
USP40-205ENST00000430158 TRIP6Q15654 476 aaKnown RBP12.19□□□□□ -0.46
USP40-205ENST00000430158 INAVAQ3KP66 663 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 TEX35Q5T0J7 233 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 ZNF449Q6P9G9 518 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 SDCCAG8Q86SQ7 713 aaPredicted RBP12.19□□□□□ -0.46
USP40-205ENST00000430158 SLCO6A1Q86UG4 719 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 LRRC6Q86X45 466 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 IFT20Q8IY31 132 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 SFRP1Q8N474 314 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 ARL10Q8N8L6 244 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 EIF1ADQ8N9N8 165 aaKnown RBP12.19□□□□□ -0.46
USP40-205ENST00000430158 GSDMBQ8TAX9 411 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 ZDHHC1Q8WTX9 485 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 CNDP2Q96KP4 475 aaKnown RBP12.19□□□□□ -0.46
USP40-205ENST00000430158 FAM167BQ9BTA0 163 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 PRDM8Q9NQV8 689 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 INTS10Q9NVR2 710 aaKnown RBP12.19□□□□□ -0.46
USP40-205ENST00000430158 NFU1Q9UMS0 254 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 CDYLQ9Y232 598 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 WDR37Q9Y2I8 494 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 PSAT1Q9Y617 370 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 PTPRBP23467 1997 aa12.19□□□□□ -0.46
USP40-205ENST00000430158 TCRBV9S1A1TA0A576 114 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 SLC5A10A0PJK1 596 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 EME2A4GXA9 379 aaPredicted RBP12.18□□□□□ -0.46
USP40-205ENST00000430158 FAM159BA6NKW6 160 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 IQCF5A8MTL0 148 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 CXorf49A8MYA2 514 aaPredicted RBP12.18□□□□□ -0.46
USP40-205ENST00000430158 GPC4O75487 556 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 NDUFS3O75489 264 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 HAUS5O94927 633 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 SLU7O95391 586 aaKnown RBP12.18□□□□□ -0.46
USP40-205ENST00000430158 AHSGP02765 367 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 GSTM1P09488 218 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 ALPPL2P10696 532 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 F3P13726 295 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 CKMT2P17540 419 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 TNFRSF8P28908 595 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 PMLP29590 882 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 CCR7P32248 378 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 PPARGP37231 505 aaPredicted RBP12.18□□□□□ -0.46
USP40-205ENST00000430158 ACADVLP49748 655 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 UBE2IP63279 158 aaKnown RBP12.18□□□□□ -0.46
USP40-205ENST00000430158 GSTM4Q03013 218 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 DNAJC3Q13217 504 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 THOC5Q13769 683 aaKnown RBP12.18□□□□□ -0.46
USP40-205ENST00000430158 GBX1Q14549 363 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 CLCA4Q14CN2 919 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 INSCQ1MX18 579 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.18□□□□□ -0.46
USP40-205ENST00000430158 RNF187Q5TA31 235 aaPredicted RBP12.18□□□□□ -0.46
USP40-205ENST00000430158 CAPRIN2Q6IMN6 1127 aaKnown RBP12.18□□□□□ -0.46
USP40-205ENST00000430158 CNSTQ6PJW8 725 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 KIAA0408Q6ZU52 694 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 ZNF438Q7Z4V0 828 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 ARL14Q8N4G2 192 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 HM13Q8TCT9 377 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 CALML6Q8TD86 181 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 FMO2Q99518 471 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 TTC1Q99614 292 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 FUT8Q9BYC5 575 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 OR52A5Q9H2C5 316 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 DPEP2Q9H4A9 486 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 FBXO6Q9NRD1 293 aaPredicted RBP12.18□□□□□ -0.46
USP40-205ENST00000430158 LATS2Q9NRM7 1088 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 NINJ2Q9NZG7 142 aa12.18□□□□□ -0.46
USP40-205ENST00000430158 ZNF624Q9P2J8 865 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms