RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 BCKDKO14874 412 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 CCNE2O96020 404 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 ARMC5Q96C12 935 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 MRIQ9BWK5 157 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 ERVK-5Q9HDB9 667 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 CHST10O43529 356 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 TIE1P35590 1138 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 ALDH3A2P51648 485 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 CLCQ05315 142 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 TAC4Q86UU9 113 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 FKBPLQ9UIM3 349 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 B3GALT2O43825 422 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 B4GALT4O60513 344 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 PRKCGP05129 697 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 PRKCHP24723 683 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 GAD2Q05329 585 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 VARS2Q5ST30 1063 aaKnown RBP15.23■□□□□ 0.03
PTPRF-206ENST00000429895 KCTD8Q6ZWB6 473 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 SLAIN1Q8ND83 568 aa15.23■□□□□ 0.03
PTPRF-206ENST00000429895 PRPF19Q9UMS4 504 aaKnown RBP15.23■□□□□ 0.03
PTPRF-206ENST00000429895 hCG_2039718K7EN88 272 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 MT-CYBP00156 380 aaPredicted RBP15.22■□□□□ 0.03
PTPRF-206ENST00000429895 DRD4P21917 467 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 CCKBRP32239 447 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 HSF2Q03933 536 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 REP15Q6BDI9 236 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 SLC26A9Q7LBE3 791 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 TBC1D21Q8IYX1 336 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 ARHGEF4Q9NR80 690 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 STOML2Q9UJZ1 356 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 CPED1A4D0V7 1026 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 FADS2P1A8MWK0 482 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 NMBRP28336 390 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 RTP1P59025 263 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 C2orf27AQ580R0 203 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 PIGXQ8TBF5 258 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 HMGB4Q8WW32 186 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 HAVCR1Q96D42 359 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 HIST1H2AAQ96QV6 131 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 CYP2S1Q96SQ9 504 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 ZNF541Q9H0D2 1346 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 ELOVL7A1L3X0 281 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 PLSCR1O15162 318 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 IFNW1P05000 195 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 C8AP07357 584 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 CD48P09326 243 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 SMPD1P17405 629 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 CRHR1P34998 444 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 PPP3R1P63098 170 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 OR2L3Q8NG85 312 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 CIB1Q99828 191 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 DMTF1Q9Y222 760 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 R3HDM2Q9Y2K5 976 aaKnown RBP15.22■□□□□ 0.03
PTPRF-206ENST00000429895 RWDD3Q9Y3V2 267 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 ABCA9Q8IUA7 1624 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 A0A0G2JN53 185 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 A0A1B0GVM2 712 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 TCAF2A6NFQ2 919 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 B4DGG1 531 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 INHAP05111 366 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 SLC22A15Q8IZD6 547 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 CLIP4Q8N3C7 705 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 S100ZQ8WXG8 99 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 PSMG2Q969U7 264 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 EFHD2Q96C19 240 aaPredicted RBP15.22■□□□□ 0.03
PTPRF-206ENST00000429895 SCLYQ96I15 445 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 CLPTM1LQ96KA5 538 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 FGFBP2Q9BYJ0 223 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 OR2AG1Q9H205 316 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 EIF2B4Q9UI10 523 aaKnown RBP15.22■□□□□ 0.03
PTPRF-206ENST00000429895 HBS1LQ9Y450 684 aaKnown RBP15.22■□□□□ 0.03
PTPRF-206ENST00000429895 TESMINQ9Y4I5 508 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 OR4F21O95013 312 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 PLGP00747 810 aaPredicted RBP15.22■□□□□ 0.03
PTPRF-206ENST00000429895 CPN2P22792 545 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 DHPSP49366 369 aaPredicted RBP15.22■□□□□ 0.03
PTPRF-206ENST00000429895 DGKEP52429 567 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 CDH12P55289 794 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 COX18Q8N8Q8 333 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 OR2AJ1Q8NGZ0 328 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 MCFD2Q8NI22 146 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 ESAMQ96AP7 390 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 COPS4Q9BT78 406 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 MRPS30Q9NP92 439 aaKnown RBP15.22■□□□□ 0.03
PTPRF-206ENST00000429895 TCAF1Q9Y4C2 921 aa15.22■□□□□ 0.03
PTPRF-206ENST00000429895 FAM149AA5PLN7 773 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 CCNCP24863 283 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 ERICH5Q6P6B1 374 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 TRABD2AQ86V40 505 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 DPYSL5Q9BPU6 564 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 GPN1Q9HCN4 374 aaPredicted RBP15.21■□□□□ 0.03
PTPRF-206ENST00000429895 IFT46Q9NQC8 304 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 WBP11Q9Y2W2 641 aaKnown RBP15.21■□□□□ 0.03
PTPRF-206ENST00000429895 TRAFD1O14545 582 aaPredicted RBP15.21■□□□□ 0.03
PTPRF-206ENST00000429895 C4BPAP04003 597 aaKnown RBP15.21■□□□□ 0.03
PTPRF-206ENST00000429895 ZNF8P17098 575 aaPredicted RBP15.21■□□□□ 0.03
PTPRF-206ENST00000429895 KLF10Q13118 480 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 SGCBQ16585 318 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 RANBP3LQ86VV4 465 aaPredicted RBP15.21■□□□□ 0.03
PTPRF-206ENST00000429895 ALG3Q92685 438 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms