RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 RIF1Q5UIP0 2472 aaKnown RBP16.78■□□□□ 0.28
LINC00887-203ENST00000429578 SPTY2D1-AS1A0A0U1RR47 76 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 PRSS38A1L453 326 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 KMOO15229 486 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 WNT1P04628 370 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 AOAHP28039 575 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 CCR7P32248 378 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 CCNFP41002 786 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 SLC18A2Q05940 514 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 PAQR3Q6TCH7 311 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 CRTC3Q6UUV7 619 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 TMEM207Q6UWW9 146 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 C4orf33Q8N1A6 199 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 INPP5DQ92835 1189 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 ALKBH8Q96BT7 664 aaKnown RBP16.78■□□□□ 0.28
LINC00887-203ENST00000429578 SLC30A3Q99726 388 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 VPS11Q9H270 941 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 MRPL40Q9NQ50 206 aaKnown RBP16.78■□□□□ 0.28
LINC00887-203ENST00000429578 PCMTD2Q9NV79 361 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 ZNHIT2Q9UHR6 403 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 SUFUQ9UMX1 484 aa16.78■□□□□ 0.28
LINC00887-203ENST00000429578 ARHGEF17Q96PE2 2063 aaPredicted RBP16.78■□□□□ 0.28
LINC00887-203ENST00000429578 A0A087X1B8 175 aa16.77■□□□□ 0.28
LINC00887-203ENST00000429578 C17orf113A0A1B0GUU1 675 aa16.77■□□□□ 0.28
LINC00887-203ENST00000429578 BCAT2O15382 392 aaPredicted RBP16.77■□□□□ 0.28
LINC00887-203ENST00000429578 CREB1P16220 341 aa16.77■□□□□ 0.28
LINC00887-203ENST00000429578 SLC26A3P40879 764 aa16.77■□□□□ 0.28
LINC00887-203ENST00000429578 TTLL9Q3SXZ7 439 aa16.77■□□□□ 0.28
LINC00887-203ENST00000429578 PYCR3Q53H96 274 aa16.77■□□□□ 0.28
LINC00887-203ENST00000429578 GALNT13Q8IUC8 556 aa16.77■□□□□ 0.28
LINC00887-203ENST00000429578 ZBTB2Q8N680 514 aa16.77■□□□□ 0.28
LINC00887-203ENST00000429578 ELMO1Q92556 727 aa16.77■□□□□ 0.28
LINC00887-203ENST00000429578 UBXN10Q96LJ8 280 aa16.77■□□□□ 0.28
LINC00887-203ENST00000429578 CYP4F12Q9HCS2 524 aa16.77■□□□□ 0.28
LINC00887-203ENST00000429578 KLQ9UEF7 1012 aa16.77■□□□□ 0.28
LINC00887-203ENST00000429578 MOSPD1Q9UJG1 213 aa16.77■□□□□ 0.28
LINC00887-203ENST00000429578 ANKRD6Q9Y2G4 727 aa16.77■□□□□ 0.28
LINC00887-203ENST00000429578 PRKAB1Q9Y478 270 aa16.77■□□□□ 0.28
LINC00887-203ENST00000429578 RALGAPA1Q6GYQ0 2036 aa16.77■□□□□ 0.27
LINC00887-203ENST00000429578 KLHL33A6NCF5 533 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 MGAT4DA6NG13 374 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 TLR4O00206 839 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 POP7O75817 140 aaKnown RBP16.76■□□□□ 0.27
LINC00887-203ENST00000429578 COL6A2P12110 1019 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 ID4P47928 161 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 AFF3P51826 1226 aaKnown RBP16.76■□□□□ 0.27
LINC00887-203ENST00000429578 BOP1Q14137 746 aaKnown RBP16.76■□□□□ 0.27
LINC00887-203ENST00000429578 SIM2Q14190 667 aaPredicted RBP16.76■□□□□ 0.27
LINC00887-203ENST00000429578 TBC1D1Q86TI0 1168 aaPredicted RBP16.76■□□□□ 0.27
LINC00887-203ENST00000429578 OXR1Q8N573 874 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 BANPQ8N9N5 519 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 OR2L2Q8NH16 312 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 ASZ1Q8WWH4 475 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 OR1E3Q8WZA6 343 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 PDXPQ96GD0 296 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 SSU72Q9NP77 194 aaKnown RBP16.76■□□□□ 0.27
LINC00887-203ENST00000429578 GULP1Q9UBP9 304 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 ADAMTS9Q9P2N4 1935 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 FRYLO94915 3013 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 PRR5-ARHGAP8B1AHC4 643 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 VILLO15195 856 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 APOA4P06727 396 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 CCDC166P0CW27 439 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 BRAFP15056 766 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 GNSP15586 552 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 GNPDA1P46926 289 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 IL2P60568 153 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 SRP54P61011 504 aaKnown RBP16.76■□□□□ 0.27
LINC00887-203ENST00000429578 ARHGAP8P85298 464 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 IRF9Q00978 393 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 FZD2Q14332 565 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 ZNF658BQ4V348 819 aaPredicted RBP16.76■□□□□ 0.27
LINC00887-203ENST00000429578 PLEKHS1Q5SXH7 462 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 LAYNQ6UX15 382 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 CLEC14AQ86T13 490 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 LCA5Q86VQ0 697 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 AMZ2Q86W34 360 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 CPNE9Q8IYJ1 553 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 CENPLQ8N0S6 344 aaPredicted RBP16.76■□□□□ 0.27
LINC00887-203ENST00000429578 NKAPQ8N5F7 415 aaKnown RBP16.76■□□□□ 0.27
LINC00887-203ENST00000429578 ANKRD49Q8WVL7 239 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 TSACCQ96A04 125 aaPredicted RBP16.76■□□□□ 0.27
LINC00887-203ENST00000429578 SKA1Q96BD8 255 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 SLC13A1Q9BZW2 595 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 CARS2Q9HA77 564 aaKnown RBP16.76■□□□□ 0.27
LINC00887-203ENST00000429578 MKS1Q9NXB0 559 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 SUSD2Q9UGT4 822 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 DCDC2Q9UHG0 476 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 PILRBQ9UKJ0 227 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 RAB23Q9ULC3 237 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 PNMA8BQ9ULN7 279 aaPredicted RBP16.76■□□□□ 0.27
LINC00887-203ENST00000429578 DGKBQ9Y6T7 804 aa16.76■□□□□ 0.27
LINC00887-203ENST00000429578 A0A1B0GTW7 788 aa16.75■□□□□ 0.27
LINC00887-203ENST00000429578 H3BQF6 201 aa16.75■□□□□ 0.27
LINC00887-203ENST00000429578 EIF3FO00303 357 aaPredicted RBP16.75■□□□□ 0.27
LINC00887-203ENST00000429578 COPEO14579 308 aa16.75■□□□□ 0.27
LINC00887-203ENST00000429578 GPC4O75487 556 aa16.75■□□□□ 0.27
LINC00887-203ENST00000429578 DGKAP23743 735 aa16.75■□□□□ 0.27
LINC00887-203ENST00000429578 PBLDP30039 288 aaPredicted RBP16.75■□□□□ 0.27
LINC00887-203ENST00000429578 GMPRP36959 345 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms