RNA–Protein interactions for RNA: ENST00000429035.1

SDC1-204, Transcript of syndecan 1, humanhuman

TSL 3

Gene SDC1, Length 646 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-204ENST00000429035 KLHL35Q6PF15 583 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 CERS6Q6ZMG9 384 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 OOSP2Q86WS3 158 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 TEX19Q8NA77 164 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 DDHD1Q8NEL9 900 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 KLHL6Q8WZ60 621 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 UBXN4Q92575 508 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 FCRL5Q96RD9 977 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 WWP1Q9H0M0 922 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 LHX9Q9NQ69 397 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 SOHLH2Q9NX45 425 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 IL17CQ9P0M4 197 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 PADI1Q9ULC6 663 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 PLAAQ9Y263 795 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 hCG_1818297A0A087WSY0 165 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 DDX3YO15523 660 aaKnown RBP14.19□□□□□ -0.14
SDC1-204ENST00000429035 CREG1O75629 220 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 NTRK1P04629 796 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 SLC35G4P0C7Q5 338 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 ACY1Q03154 408 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 DMPKQ09013 629 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 KRT33BQ14525 404 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 GSE1Q14687 1217 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 LONRF2Q1L5Z9 754 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 CRTC2Q53ET0 693 aaPredicted RBP14.19□□□□□ -0.14
SDC1-204ENST00000429035 PWWP2BQ6NUJ5 590 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 TMEM126BQ8IUX1 230 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 CNGA4Q8IV77 575 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 ZNF514Q96K75 400 aaPredicted RBP14.19□□□□□ -0.14
SDC1-204ENST00000429035 RUFY1Q96T51 708 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 APOL2Q9BQE5 337 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 ACTL8Q9H568 366 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 C10orf88Q9H8K7 445 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.19□□□□□ -0.14
SDC1-204ENST00000429035 ANKMY1Q9P2S6 941 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 EPHA6Q9UF33 1036 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 FKBPLQ9UIM3 349 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 ARL5AQ9Y689 179 aa14.19□□□□□ -0.14
SDC1-204ENST00000429035 SPTBP11277 2137 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 UBR5O95071 2799 aaPredicted RBP14.18□□□□□ -0.14
SDC1-204ENST00000429035 NAV2Q8IVL1 2488 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 OR5K3A6NET4 321 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 TLCD2A6NGC4 264 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 AKR1B15C9JRZ8 316 aaPredicted RBP14.18□□□□□ -0.14
SDC1-204ENST00000429035 K7EM74 188 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 KCNJ13O60928 360 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 DNAJB5O75953 348 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 PTMSP20962 102 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 MAGEA1P43355 309 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 GEMP55040 296 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 TMPRSS15P98073 1019 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 ASB18Q6ZVZ8 466 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 RBM41Q96IZ5 413 aaKnown RBP14.18□□□□□ -0.14
SDC1-204ENST00000429035 SLC41A2Q96JW4 573 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 VAT1Q99536 393 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 HEMGNQ9BXL5 484 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 RAB33BQ9H082 229 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 GBA3Q9H227 469 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 TSPY26PQ9H489 355 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 FGF21Q9NSA1 209 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 HRASLS2Q9NWW9 162 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 CRLS1Q9UJA2 301 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 INTUQ9ULD6 942 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 TFR2Q9UP52 801 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 ALG6Q9Y672 507 aa14.18□□□□□ -0.14
SDC1-204ENST00000429035 OR6C74A6NCV1 312 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 HACD1B0YJ81 288 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 C21orf140B9A014 251 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 GAPDHSO14556 408 aaPredicted RBP14.17□□□□□ -0.14
SDC1-204ENST00000429035 SCRG1O75711 98 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 ZRANB2O95218 330 aaKnown RBP eCLIP14.17□□□□□ -0.14
SDC1-204ENST00000429035 AGTP01019 485 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 EPOP01588 193 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 CTNNA2P26232 953 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 RBL1P28749 1068 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 PMS2P54278 862 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 MLLT10P55197 1068 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 PDE1BQ01064 536 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 CHAF1BQ13112 559 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 OLIG2Q13516 323 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 UBAP2LQ14157 1087 aaKnown RBP14.17□□□□□ -0.14
SDC1-204ENST00000429035 GPR19Q15760 415 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 TAZQ16635 292 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 CPZQ66K79 652 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 ITPRIPL1Q6GPH6 555 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 FAM199XQ6PEV8 388 aaPredicted RBP14.17□□□□□ -0.14
SDC1-204ENST00000429035 FBXO38Q6PIJ6 1188 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 ATCAYQ86WG3 371 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 KATNAL2Q8IYT4 538 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 SPDYE1Q8NFV5 336 aaPredicted RBP14.17□□□□□ -0.14
SDC1-204ENST00000429035 OR4K2Q8NGD2 314 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 ZNF398Q8TD17 642 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 KRT35Q92764 455 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 MR1Q95460 341 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 DCUN1D1Q96GG9 259 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 INSM2Q96T92 566 aaPredicted RBP14.17□□□□□ -0.14
SDC1-204ENST00000429035 CD180Q99467 661 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 FERMT1Q9BQL6 677 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 ASB8Q9H765 288 aa14.17□□□□□ -0.14
SDC1-204ENST00000429035 SMOXQ9NWM0 555 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms