RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 MSS51Q4VC12 460 aa11.29□□□□□ -0.6
CECR3-201ENST00000428828 GOLM1Q8NBJ4 401 aa11.29□□□□□ -0.6
CECR3-201ENST00000428828 WFIKKN2Q8TEU8 576 aa11.29□□□□□ -0.6
CECR3-201ENST00000428828 TTC9Q92623 222 aa11.29□□□□□ -0.6
CECR3-201ENST00000428828 FBXL8Q96CD0 374 aa11.29□□□□□ -0.6
CECR3-201ENST00000428828 ERLEC1Q96DZ1 483 aa11.29□□□□□ -0.6
CECR3-201ENST00000428828 VMP1Q96GC9 406 aa11.29□□□□□ -0.6
CECR3-201ENST00000428828 ZNF419Q96HQ0 510 aaPredicted RBP11.29□□□□□ -0.6
CECR3-201ENST00000428828 FEM1CQ96JP0 617 aa11.29□□□□□ -0.6
CECR3-201ENST00000428828 EXOC2Q96KP1 924 aa11.29□□□□□ -0.6
CECR3-201ENST00000428828 ZNF778Q96MU6 729 aa11.29□□□□□ -0.6
CECR3-201ENST00000428828 MECRQ9BV79 373 aa11.29□□□□□ -0.6
CECR3-201ENST00000428828 COQ10BQ9H8M1 238 aa11.29□□□□□ -0.6
CECR3-201ENST00000428828 CD320Q9NPF0 282 aa11.29□□□□□ -0.6
CECR3-201ENST00000428828 SLC2A4RGQ9NR83 387 aa11.29□□□□□ -0.6
CECR3-201ENST00000428828 KLHL8Q9P2G9 620 aaPredicted RBP11.29□□□□□ -0.6
CECR3-201ENST00000428828 MARCOQ9UEW3 520 aaPredicted RBP11.29□□□□□ -0.6
CECR3-201ENST00000428828 POU2F3Q9UKI9 436 aa11.29□□□□□ -0.6
CECR3-201ENST00000428828 FBXL21Q9UKT6 434 aa11.29□□□□□ -0.6
CECR3-201ENST00000428828 PSME2Q9UL46 239 aa11.29□□□□□ -0.6
CECR3-201ENST00000428828 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.28□□□□□ -0.6
CECR3-201ENST00000428828 TRIM49D1C9J1S8 452 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 MATN3O15232 486 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 BNIP3LO60238 219 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 GUCY1B2O75343 617 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 RNASEH2AO75792 299 aaKnown RBP11.28□□□□□ -0.6
CECR3-201ENST00000428828 ZMPSTE24O75844 475 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 ALX3O95076 343 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 FKBP9O95302 570 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 SERPINE1P05121 402 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 ABCB1P08183 1280 aaPredicted RBP11.28□□□□□ -0.6
CECR3-201ENST00000428828 KITP10721 976 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 PRKCHP24723 683 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 PTPN3P26045 913 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 CNTFP26441 200 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 EIF2DP41214 584 aaKnown RBP11.28□□□□□ -0.6
CECR3-201ENST00000428828 PLK1P53350 603 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 MAXP61244 160 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 ECT2LQ008S8 904 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 ITKQ08881 620 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 DMC1Q14565 340 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 ZNF235Q14590 738 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 MLF2Q15773 248 aaPredicted RBP11.28□□□□□ -0.6
CECR3-201ENST00000428828 MARC1Q5VT66 337 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 RETSATQ6NUM9 610 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 C4orf22Q6V702 233 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 KIAA0907Q7Z7F0 614 aaPredicted RBP11.28□□□□□ -0.6
CECR3-201ENST00000428828 RALGPS2Q86X27 583 aaPredicted RBP11.28□□□□□ -0.6
CECR3-201ENST00000428828 GJD3Q8N144 294 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 ZNF366Q8N895 744 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 SNX31Q8N9S9 440 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 RP9Q8TA86 221 aaKnown RBP11.28□□□□□ -0.6
CECR3-201ENST00000428828 GRIN3AQ8TCU5 1115 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 HCAR2Q8TDS4 363 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 ACMSDQ8TDX5 336 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 TSGA13Q96PP4 275 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 CINPQ9BW66 212 aaPredicted RBP11.28□□□□□ -0.6
CECR3-201ENST00000428828 C8orf33Q9H7E9 229 aaPredicted RBP11.28□□□□□ -0.6
CECR3-201ENST00000428828 C12orf10Q9HB07 376 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 NT5MQ9NPB1 228 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 FKBP14Q9NWM8 211 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 ELOVL2Q9NXB9 296 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 NDRG2Q9UN36 371 aaKnown RBP11.28□□□□□ -0.6
CECR3-201ENST00000428828 ERVW-1Q9UQF0 538 aa11.28□□□□□ -0.6
CECR3-201ENST00000428828 MYLKQ15746 1914 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 TTC24A2A3L6 582 aaPredicted RBP11.27□□□□□ -0.6
CECR3-201ENST00000428828 RGSL1A5PLK6 1076 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 SYCE1LA8MT33 242 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 SMAD6O43541 496 aaKnown RBP11.27□□□□□ -0.6
CECR3-201ENST00000428828 KLHL41O60662 606 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 CRYZL1O95825 349 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 CD160O95971 181 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 PEX11BO96011 259 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 EGFP01133 1207 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 HLA-DQB2P05538 268 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 MSL3P1P0C860 447 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 MYCLP1P12525 358 aaPredicted RBP11.27□□□□□ -0.6
CECR3-201ENST00000428828 XRCC1P18887 633 aaPredicted RBP11.27□□□□□ -0.6
CECR3-201ENST00000428828 SERPINB9P50453 376 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 SERPINH1P50454 418 aaKnown RBP11.27□□□□□ -0.6
CECR3-201ENST00000428828 THOP1P52888 689 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 NME5P56597 212 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 FNDC3BQ53EP0 1204 aaKnown RBP11.27□□□□□ -0.6
CECR3-201ENST00000428828 GPR107Q5VW38 600 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 GALNT18Q6P9A2 607 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.27□□□□□ -0.6
CECR3-201ENST00000428828 FAM20CQ8IXL6 584 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 ZNF567Q8N184 647 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 BHLHE22Q8NFJ8 381 aaPredicted RBP11.27□□□□□ -0.6
CECR3-201ENST00000428828 OR13F1Q8NGS4 319 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 FAM3CQ92520 227 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 SH3YL1Q96HL8 342 aaPredicted RBP11.27□□□□□ -0.6
CECR3-201ENST00000428828 EFHD1Q9BUP0 239 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 TM6SF2Q9BZW4 377 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 OR2B2Q9GZK3 357 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 TNKS2Q9H2K2 1166 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 SP140LQ9H930 580 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 MARCH7Q9H992 704 aa11.27□□□□□ -0.6
CECR3-201ENST00000428828 RBM22Q9NW64 420 aaKnown RBP eCLIP11.27□□□□□ -0.6
CECR3-201ENST00000428828 SLCO3A1Q9UIG8 710 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms