RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 PRPF19Q9UMS4 504 aaKnown RBP8.26□□□□□ -1.09
CD44-208ENST00000428726 TDRKHQ9Y2W6 561 aaKnown RBP8.26□□□□□ -1.09
CD44-208ENST00000428726 ZNF711Q9Y462 761 aa8.26□□□□□ -1.09
CD44-208ENST00000428726 THSD7BQ9C0I4 1608 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 TTC34A8MYJ7 566 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 STK25O00506 426 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 FFAR2O15552 330 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 LATO43561 262 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 VPS26AO75436 327 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 IGLV3-27P01718 113 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 EPCAMP16422 314 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 BPIP17213 487 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 FDXRP22570 491 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 NR4A1P22736 598 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 IL12AP29459 219 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 MAPKAPK2P49137 400 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 KPNA1P52294 538 aaPredicted RBP8.25□□□□□ -1.09
CD44-208ENST00000428726 DGKEP52429 567 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 RING1Q06587 406 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 SMARCB1Q12824 385 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 UGT3A2Q3SY77 523 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 CCSMST1Q4G0I0 132 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 PIGGQ5H8A4 983 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 ANKS6Q68DC2 871 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 SLC8B1Q6J4K2 584 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 HERC6Q8IVU3 1022 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 PQLC1Q8N2U9 271 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 AFAP1L2Q8N4X5 818 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 METTL25Q8N6Q8 603 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 OR4F6Q8NGB9 312 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 KLK6Q92876 244 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 HIC2Q96JB3 615 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 ZFRQ96KR1 1074 aaKnown RBP8.25□□□□□ -1.09
CD44-208ENST00000428726 SPATA17Q96L03 361 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 SERPINI1Q99574 410 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 MGME1Q9BQP7 344 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 KLF16Q9BXK1 252 aaPredicted RBP8.25□□□□□ -1.09
CD44-208ENST00000428726 CLPBQ9H078 707 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 MAGEH1Q9H213 219 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 IGFLR1Q9H665 355 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 ELAC1Q9H777 363 aaKnown RBP8.25□□□□□ -1.09
CD44-208ENST00000428726 IPPKQ9H8X2 491 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 LHX3Q9UBR4 397 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 PHF24Q9UPV7 400 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 NME4O00746 187 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 DIRAS1O95057 198 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 CLPTM1O96005 669 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 GLUD1P00367 558 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 PTGER1P34995 402 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 SLC26A3P40879 764 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 GALK1P51570 392 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 MEF2AQ02078 507 aaPredicted RBP8.25□□□□□ -1.09
CD44-208ENST00000428726 HERC3Q15034 1050 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 IER5LQ5T953 404 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 SLC22A9Q8IVM8 553 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 CLYBLQ8N0X4 340 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 STAG3L4Q8TBR4 150 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 MRPS31Q92665 395 aaKnown RBP8.25□□□□□ -1.09
CD44-208ENST00000428726 MYO19Q96H55 970 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 FAR2Q96K12 515 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 TSEN34Q9BSV6 310 aaKnown RBP8.25□□□□□ -1.09
CD44-208ENST00000428726 ZNF385DQ9H6B1 395 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 EML4Q9HC35 981 aaKnown RBP8.25□□□□□ -1.09
CD44-208ENST00000428726 PFDN4Q9NQP4 134 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 MRGBPQ9NV56 204 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 ELOVL2Q9NXB9 296 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 WWOXQ9NZC7 414 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 PDP2Q9P2J9 529 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 CROTQ9UKG9 612 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 AP4B1Q9Y6B7 739 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 DOCK9Q9BZ29 2069 aa8.25□□□□□ -1.09
CD44-208ENST00000428726 C7orf72A4D263 438 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 MAN1A2O60476 641 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 F11P03951 625 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 SOD2P04179 222 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 NFKBIAP25963 317 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 ETV3P41162 512 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 CYP27C1Q4G0S4 372 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 LY6G5CQ5SRR4 150 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 SLAIN1Q8ND83 568 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 FBXO30Q8TB52 745 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 PEX13Q92968 403 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 MED8Q96G25 268 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 MAELQ96JY0 434 aaKnown RBP8.24□□□□□ -1.09
CD44-208ENST00000428726 ADGRE3Q9BY15 652 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 VCX3BQ9H321 246 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 STK39Q9UEW8 545 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 PNMA8BQ9ULN7 279 aaPredicted RBP8.24□□□□□ -1.09
CD44-208ENST00000428726 ASCC3Q8N3C0 2202 aaKnown RBP8.24□□□□□ -1.09
CD44-208ENST00000428726 TYW5A2RUC4 315 aaKnown RBP8.24□□□□□ -1.09
CD44-208ENST00000428726 RFXAPO00287 272 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 LEFTY2O00292 366 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 B4GAT1O43505 415 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 PFDN1O60925 122 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 EPOP01588 193 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 TFPTP0C1Z6 253 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 ZDHHC11BP0C7U3 371 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 PRKACGP22612 351 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 LHCGRP22888 699 aa8.24□□□□□ -1.09
CD44-208ENST00000428726 ELAVL2Q12926 359 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms