RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 SLC14A2Q15849 920 aa16.17■□□□□ 0.18
VARS-216ENST00000428445 PPP2R5EQ16537 467 aa16.17■□□□□ 0.18
VARS-216ENST00000428445 GPRC6AQ5T6X5 926 aa16.17■□□□□ 0.18
VARS-216ENST00000428445 APLFQ8IW19 511 aaPredicted RBP16.17■□□□□ 0.18
VARS-216ENST00000428445 RBM12BQ8IXT5 1001 aaKnown RBP16.17■□□□□ 0.18
VARS-216ENST00000428445 BLOC1S5Q8TDH9 187 aa16.17■□□□□ 0.18
VARS-216ENST00000428445 UBXN4Q92575 508 aa16.17■□□□□ 0.18
VARS-216ENST00000428445 OXNAD1Q96HP4 312 aaPredicted RBP16.17■□□□□ 0.18
VARS-216ENST00000428445 ZNF514Q96K75 400 aaPredicted RBP16.17■□□□□ 0.18
VARS-216ENST00000428445 MRGPRX2Q96LB1 330 aa16.17■□□□□ 0.18
VARS-216ENST00000428445 WWP1Q9H0M0 922 aa16.17■□□□□ 0.18
VARS-216ENST00000428445 C10orf88Q9H8K7 445 aa16.17■□□□□ 0.18
VARS-216ENST00000428445 HRASLS2Q9NWW9 162 aa16.17■□□□□ 0.18
VARS-216ENST00000428445 LUZP4Q9P127 313 aa16.17■□□□□ 0.18
VARS-216ENST00000428445 FAM153AQ9UHL3 310 aa16.17■□□□□ 0.18
VARS-216ENST00000428445 SHANK1Q9Y566 2161 aa16.16■□□□□ 0.18
VARS-216ENST00000428445 SSU72P8A0A1W2PR75 194 aa16.16■□□□□ 0.18
VARS-216ENST00000428445 UBA6A0AVT1 1052 aaPredicted RBP16.16■□□□□ 0.18
VARS-216ENST00000428445 LCA5LO95447 670 aa16.16■□□□□ 0.18
VARS-216ENST00000428445 RNF224P0DH78 156 aa16.16■□□□□ 0.18
VARS-216ENST00000428445 SPAM1P38567 509 aa16.16■□□□□ 0.18
VARS-216ENST00000428445 ARL4DP49703 201 aa16.16■□□□□ 0.18
VARS-216ENST00000428445 GPS2Q13227 327 aa16.16■□□□□ 0.18
VARS-216ENST00000428445 PRKD1Q15139 912 aaPredicted RBP16.16■□□□□ 0.18
VARS-216ENST00000428445 UGT8Q16880 541 aa16.16■□□□□ 0.18
VARS-216ENST00000428445 DNTTIP2Q5QJE6 756 aaKnown RBP16.16■□□□□ 0.18
VARS-216ENST00000428445 FNBP1LQ5T0N5 605 aa16.16■□□□□ 0.18
VARS-216ENST00000428445 ZC3H18Q86VM9 953 aaKnown RBP16.16■□□□□ 0.18
VARS-216ENST00000428445 RHOT1Q8IXI2 618 aa16.16■□□□□ 0.18
VARS-216ENST00000428445 LILRA3Q8N6C8 439 aaPredicted RBP16.16■□□□□ 0.18
VARS-216ENST00000428445 IPMKQ8NFU5 416 aa16.16■□□□□ 0.18
VARS-216ENST00000428445 CPT1CQ8TCG5 803 aa16.16■□□□□ 0.18
VARS-216ENST00000428445 BRSK1Q8TDC3 778 aa16.16■□□□□ 0.18
VARS-216ENST00000428445 MR1Q95460 341 aa16.16■□□□□ 0.18
VARS-216ENST00000428445 HAUS1Q96CS2 278 aa16.16■□□□□ 0.18
VARS-216ENST00000428445 DEF6Q9H4E7 631 aa16.16■□□□□ 0.18
VARS-216ENST00000428445 FARSAQ9Y285 508 aaKnown RBP16.16■□□□□ 0.18
VARS-216ENST00000428445 GLYATL1P3A0A0U1RQE8 302 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 OR6C74A6NCV1 312 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 OR5K3A6NET4 321 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 C21orf140B9A014 251 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 AKR1B10O60218 316 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 CST8O60676 142 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 VPS4BO75351 444 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 SCRG1O75711 98 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 POLBP06746 335 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 MTHFD1P11586 935 aaKnown RBP16.15■□□□□ 0.18
VARS-216ENST00000428445 KPNA2P52292 529 aaKnown RBP16.15■□□□□ 0.18
VARS-216ENST00000428445 ACY1Q03154 408 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 DMPKQ09013 629 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 XRCC4Q13426 336 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 OLIG2Q13516 323 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 SPTAN1Q13813 2472 aaKnown RBP16.15■□□□□ 0.18
VARS-216ENST00000428445 PRR30Q53SZ7 412 aaPredicted RBP16.15■□□□□ 0.18
VARS-216ENST00000428445 LRRC38Q5VT99 294 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 METRNLQ641Q3 311 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 CAPRIN2Q6IMN6 1127 aaKnown RBP16.15■□□□□ 0.18
VARS-216ENST00000428445 BZW1Q7L1Q6 419 aaKnown RBP16.15■□□□□ 0.18
VARS-216ENST00000428445 PID1Q7Z2X4 250 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 GLT6D1Q7Z4J2 308 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 TMEM126BQ8IUX1 230 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 D2HGDHQ8N465 521 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 OR8K1Q8NGG5 319 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 TFB1MQ8WVM0 346 aaKnown RBP16.15■□□□□ 0.18
VARS-216ENST00000428445 C12orf66Q96MD2 445 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 SLC25A23Q9BV35 468 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 TEX15Q9BXT5 2789 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 MFRPQ9BY79 579 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 ING2Q9H160 280 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 CHST8Q9H2A9 424 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 GOLPH3Q9H4A6 298 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 CCDC88CQ9P219 2028 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 VPS4AQ9UN37 437 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 ARL5AQ9Y689 179 aa16.15■□□□□ 0.18
VARS-216ENST00000428445 KCNJ13O60928 360 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 SEMA7AO75326 666 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 AGTP01019 485 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 POLR2CP19387 275 aaPredicted RBP16.14■□□□□ 0.17
VARS-216ENST00000428445 COMTP21964 271 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 CDKN2BP42772 138 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 PTGIRP43119 386 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 RPS15P62841 145 aaKnown RBP16.14■□□□□ 0.17
VARS-216ENST00000428445 HSD11B2P80365 405 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 TRIM14Q14142 442 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 ESPL1Q14674 2120 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 SLC1A5Q15758 541 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 ODF2Q5BJF6 829 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 LDLRAP1Q5SW96 308 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 DAAM2Q86T65 1068 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 ZNF567Q8N184 647 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 DDHD1Q8NEL9 900 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 OR4E2Q8NGC2 313 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 DTX3LQ8TDB6 740 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 ZNF501Q96CX3 271 aaPredicted RBP16.14■□□□□ 0.17
VARS-216ENST00000428445 ANP32EQ9BTT0 268 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 TLR10Q9BXR5 811 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 GPR87Q9BY21 358 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 ACSS2Q9NR19 701 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 KCND1Q9NSA2 647 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 ZNHIT6Q9NWK9 470 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms