RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 TUBB3Q13509 450 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 DNASE1L3Q13609 305 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 SEPT6Q14141 434 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 BBS12Q6ZW61 710 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 BEND7Q8N7W2 519 aaPredicted RBP12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 SIDT2Q8NBJ9 832 aaKnown RBP12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 ZNF398Q8TD17 642 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 CT55Q8WUE5 264 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 NAT14Q8WUY8 206 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 FCRL4Q96PJ5 515 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 RUFY1Q96T51 708 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 INSM2Q96T92 566 aaPredicted RBP12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 ANP32EQ9BTT0 268 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 GBA3Q9H227 469 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 PDE7BQ9NP56 450 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 RSPH14Q9UHP6 348 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 KCND3Q9UK17 655 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 RARRES3Q9UL19 164 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 PADI1Q9ULC6 663 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 TFR2Q9UP52 801 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 POLHQ9Y253 713 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 TP53TG5Q9Y2B4 290 aa12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 CFAP20Q9Y6A4 193 aaKnown RBP12.76□□□□□ -0.37
DEPDC7-203ENST00000427755 CLEC18AA5D8T8 446 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 MGAT4DA6NG13 374 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 C21orf140B9A014 251 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 APOC4-APOC2K7ER74 178 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 STX7O15400 261 aaKnown RBP12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 CREG1O75629 220 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 LCA5LO95447 670 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 APOC2P02655 101 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 MT-ND3P03897 115 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 CCNYL3P0C7X3 344 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 EBLN1P0CF75 366 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 PTMSP20962 102 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 RBL1P28749 1068 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 PBLDP30039 288 aaPredicted RBP12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 ADRA1AP35348 466 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 MAGEA1P43355 309 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 TNNT3P45378 269 aaPredicted RBP12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 XIAPP98170 497 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 XRCC4Q13426 336 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 LAMB3Q13751 1172 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 TAF1AQ15573 450 aaPredicted RBP12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 LONRF2Q1L5Z9 754 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 BCL7AQ4VC05 210 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 FNBP1LQ5T0N5 605 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 C11orf63Q6NUN7 778 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 TCTN3Q6NUS6 607 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 DUS1LQ6P1R4 473 aaKnown RBP12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 CYB5D1Q6P9G0 228 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 KLHL35Q6PF15 583 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 CLEC18BQ6UXF7 455 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 RANBP10Q6VN20 620 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 DET1Q7L5Y6 550 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 KMT5CQ86Y97 462 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 D2HGDHQ8N465 521 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 TC2NQ8N9U0 490 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 CLEC18CQ8NCF0 446 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 RNF214Q8ND24 703 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 RBM41Q96IZ5 413 aaKnown RBP12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 ZNF514Q96K75 400 aaPredicted RBP12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 LINC00615Q96LM1 132 aaPredicted RBP12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 CD180Q99467 661 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 FICDQ9BVA6 458 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 HEMGNQ9BXL5 484 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 FSD1LQ9BXM9 530 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 WWP1Q9H0M0 922 aa12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 IMP3Q9NV31 184 aaKnown RBP12.75□□□□□ -0.37
DEPDC7-203ENST00000427755 RELNP78509 3460 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 PIPSLA2A3N6 862 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 CDC14CA4D256 554 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 TLCD2A6NGC4 264 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 AGAP14A8MT82 685 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 SRP72O76094 671 aaKnown RBP12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 MSH3P20585 1137 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 LPOP22079 712 aaPredicted RBP12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 PMS2P54278 862 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 GEMP55040 296 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 ACY1Q03154 408 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 OLIG2Q13516 323 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 PLCL1Q15111 1095 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 DNTTIP2Q5QJE6 756 aaKnown RBP12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 BPHLQ86WA6 291 aaPredicted RBP12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 CCDC50Q8IVM0 306 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 LILRA3Q8N6C8 439 aaPredicted RBP12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 OR4K2Q8NGD2 314 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 OR2L2Q8NH16 312 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 ZFPM2Q8WW38 1151 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 C12orf66Q96MD2 445 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 PPM1MQ96MI6 270 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 APOL2Q9BQE5 337 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 TWSG1Q9GZX9 223 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 TSPY26PQ9H489 355 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 ACTL8Q9H568 366 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 KIR3DX1Q9H7L2 352 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 FGF21Q9NSA1 209 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 HRASLS2Q9NWW9 162 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 SLC24A2Q9UI40 661 aa12.74□□□□□ -0.37
DEPDC7-203ENST00000427755 FKBPLQ9UIM3 349 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms