RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 MRPL57Q9BQC6 102 aaKnown RBP5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 HERPUD2Q9BSE4 406 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 BTBD2Q9BX70 525 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 STRA6Q9BX79 667 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 ROGDIQ9GZN7 287 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 PITHD1Q9GZP4 211 aaPredicted RBP5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 PCDHAC1Q9H158 963 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 FN3KQ9H479 309 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 ALG2Q9H553 416 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 FAM124BQ9H5Z6 455 aaPredicted RBP5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 MAGIXQ9H6Y5 334 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 UCK1Q9HA47 277 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 BIN3Q9NQY0 253 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 POLE4Q9NR33 117 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 KLHL1Q9NR64 748 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 RGS18Q9NS28 235 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 FAM118AQ9NWS6 357 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 TMEM260Q9NX78 707 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 MARK1Q9P0L2 795 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 TMEM216Q9P0N5 145 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 NYAP2Q9P242 653 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 OPTCQ9UBM4 332 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 EMCNQ9ULC0 261 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 PRR12Q9ULL5 1215 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 RNF6Q9Y252 685 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 HSPB11Q9Y547 144 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 KLK4Q9Y5K2 254 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 TNPO3Q9Y5L0 923 aaKnown RBP5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 HRH3Q9Y5N1 445 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 CACNG2Q9Y698 323 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 PMF1-BGLAPU3KQ54 211 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 SIPA1L1O43166 1804 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 LOC100130705A0A1B0GUX0 176 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 A0A1B0GVI7 797 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 PIPSLA2A3N6 862 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 TTLL8A6PVC2 850 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 TMX2-CTNND1H3BSU7 103 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 MUSKO15146 869 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 INPPL1O15357 1258 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 KCNN4O15554 427 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 PSMD3O43242 534 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 SPINT1O43278 529 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 FAM20BO75063 409 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 BANF1O75531 89 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 RECQL5O94762 991 aaPredicted RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 RHOBTB1O94844 696 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 GSRP00390 522 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 GOT2P00505 430 aaKnown RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 C1QAP02745 245 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 TPOP07202 933 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 PSAPP07602 524 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 SPATA31C1P0DKV0 1188 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 SNHG28P0DPA3 235 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 RRASP10301 218 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 CYP2A6P11509 494 aaPredicted RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 CKMT1AP12532 417 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 SRCP12931 536 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 TCF3P15923 654 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 HOXB8P17481 243 aaPredicted RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ATP6V1B2P21281 511 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ATP5F1P24539 256 aaPredicted RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ELK4P28324 431 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 HSD17B2P37059 387 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 PIK3CBP42338 1070 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 KCNC1P48547 511 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 MAPK10P53779 464 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ATXN3P54252 364 aaPredicted RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ATP12AP54707 1039 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 BCAR1P56945 870 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 DYNLT1P63172 113 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 RACK1P63244 317 aaKnown RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 RPP38P78345 283 aaKnown RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 IL5RAQ01344 420 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 EMX1Q04741 257 aaPredicted RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 STX4Q12846 297 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 NFIAQ12857 509 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ABRQ12979 859 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 SNTA1Q13424 505 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 PEX6Q13608 980 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 CUL2Q13617 745 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ELOAQ14241 798 aaKnown RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZNF267Q14586 743 aaPredicted RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZNF169Q14929 603 aaPredicted RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 EIF4HQ15056 248 aaKnown RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 FSCN1Q16658 493 aaKnown RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 HSDL1Q3SXM5 330 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 IGSF11Q5DX21 431 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ARL13AQ5H913 290 aaPredicted RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 HES5Q5TA89 166 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ATF7IP2Q5U623 682 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 HACD4Q5VWC8 232 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 HEATR6Q6AI08 1181 aaKnown RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 TEX261Q6UWH6 196 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 TMPRSS11AQ6ZMR5 421 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZNF367Q7RTV3 350 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 SPATA19Q7Z5L4 167 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 KRT77Q7Z794 578 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 CLEC14AQ86T13 490 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 DPP9Q86TI2 863 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 CCDC190Q86UF4 302 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms