RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 SDR42E2A6NKP2 422 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 CD3EAPO15446 510 aaKnown RBP17.66■□□□□ 0.42
HERC3-205ENST00000426683 DUX1O43812 170 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 OR1I1O60431 355 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 POLBP06746 335 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 CSF2RBP32927 897 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 EPHA4P54764 986 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 ZFP36L1Q07352 338 aaKnown RBP17.66■□□□□ 0.42
HERC3-205ENST00000426683 SQSTM1Q13501 440 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 AARS2Q5JTZ9 985 aaKnown RBP17.66■□□□□ 0.42
HERC3-205ENST00000426683 PHF19Q5T6S3 580 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 IZUMO3Q5VZ72 239 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 ARMC3Q5W041 872 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 ZNF574Q6ZN55 896 aaPredicted RBP17.66■□□□□ 0.42
HERC3-205ENST00000426683 TMEM26Q6ZUK4 368 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 PCGF5Q86SE9 256 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 LDB1Q86U70 411 aaPredicted RBP17.66■□□□□ 0.42
HERC3-205ENST00000426683 JAMLQ86YT9 394 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 LILRA3Q8N6C8 439 aaPredicted RBP17.66■□□□□ 0.42
HERC3-205ENST00000426683 LIN37Q96GY3 246 aaPredicted RBP17.66■□□□□ 0.42
HERC3-205ENST00000426683 SEMA6CQ9H3T2 930 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 COG4Q9H9E3 785 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 POLR1BQ9H9Y6 1135 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 UCK1Q9HA47 277 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 SAMD15Q9P1V8 674 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 MARCH4Q9P2E8 410 aaPredicted RBP17.66■□□□□ 0.42
HERC3-205ENST00000426683 DKK4Q9UBT3 224 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 ZMIZ1Q9ULJ6 1067 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 BPTFQ12830 3046 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 LILRA5A6NI73 299 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 QSOX1O00391 747 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 TTI1O43156 1089 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 BRINP1O60477 761 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 VAPBO95292 243 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 SLC35G4P0C7Q5 338 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 HOXB3P14651 431 aaPredicted RBP17.65■□□□□ 0.42
HERC3-205ENST00000426683 PPARGP37231 505 aaPredicted RBP17.65■□□□□ 0.42
HERC3-205ENST00000426683 MAGEA3P43357 314 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 LSSP48449 732 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 CFHR1Q03591 330 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 FOXR1Q6PIV2 292 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 RBM12BQ8IXT5 1001 aaKnown RBP17.65■□□□□ 0.42
HERC3-205ENST00000426683 OTUD6BQ8N6M0 293 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 GPR150Q8NGU9 434 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 WDR36Q8NI36 951 aaKnown RBP17.65■□□□□ 0.42
HERC3-205ENST00000426683 C12orf66Q96MD2 445 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 INSM2Q96T92 566 aaPredicted RBP17.65■□□□□ 0.42
HERC3-205ENST00000426683 KRT12Q99456 494 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 DPYSL5Q9BPU6 564 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 TRIM56Q9BRZ2 755 aaKnown RBP17.65■□□□□ 0.42
HERC3-205ENST00000426683 TRIM51Q9BSJ1 452 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 SLC40A1Q9NP59 571 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 IMP3Q9NV31 184 aaKnown RBP17.65■□□□□ 0.42
HERC3-205ENST00000426683 TMEM9Q9P0T7 183 aa17.65■□□□□ 0.42
HERC3-205ENST00000426683 CFAP20Q9Y6A4 193 aaKnown RBP17.65■□□□□ 0.42
HERC3-205ENST00000426683 CEP295Q9C0D2 2601 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 MAGEB16A2A368 324 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 PMS2P1A4D2B8 440 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 AGRPO00253 132 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 TAF4O00268 1085 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 FTH1P02794 183 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 GSTM1P09488 218 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 OR56A5P0C7T3 313 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 MTHFD1P11586 935 aaKnown RBP17.64■□□□□ 0.41
HERC3-205ENST00000426683 MPSTP25325 297 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 IVDP26440 423 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 ARNTP27540 789 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 TTPAP49638 278 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 GSTM4Q03013 218 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 EIF3IQ13347 325 aaKnown RBP17.64■□□□□ 0.41
HERC3-205ENST00000426683 DHX34Q14147 1143 aaKnown RBP17.64■□□□□ 0.41
HERC3-205ENST00000426683 GPR18Q14330 331 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 ZNF658BQ4V348 819 aaPredicted RBP17.64■□□□□ 0.41
HERC3-205ENST00000426683 KIAA0930Q6ICG6 404 aaPredicted RBP17.64■□□□□ 0.41
HERC3-205ENST00000426683 DUS1LQ6P1R4 473 aaKnown RBP17.64■□□□□ 0.41
HERC3-205ENST00000426683 TMEM71Q6P5X7 295 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 HOOK3Q86VS8 718 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 PROSER1Q86XN7 944 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 LSMEM2Q8N112 164 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 SPDYE1Q8NFV5 336 aaPredicted RBP17.64■□□□□ 0.41
HERC3-205ENST00000426683 OR4D9Q8NGE8 314 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 NCSTNQ92542 709 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 ZNF669Q96BR6 464 aaPredicted RBP17.64■□□□□ 0.41
HERC3-205ENST00000426683 CCDC74BQ96LY2 380 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 RMDN2Q96LZ7 410 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 C16orf45Q96MC5 204 aaPredicted RBP17.64■□□□□ 0.41
HERC3-205ENST00000426683 EPB41L1Q9H4G0 881 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 PCDHGA8Q9Y5G5 932 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 MAD1L1Q9Y6D9 718 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 AKAP13Q12802 2813 aa17.64■□□□□ 0.41
HERC3-205ENST00000426683 IGHV5-10-1A0A0J9YXX1 117 aa17.63■□□□□ 0.41
HERC3-205ENST00000426683 FAM237BA0A1B0GVD1 139 aa17.63■□□□□ 0.41
HERC3-205ENST00000426683 GOLGA8KD6RF30 607 aa17.63■□□□□ 0.41
HERC3-205ENST00000426683 GOLGA8TH3BQL2 631 aa17.63■□□□□ 0.41
HERC3-205ENST00000426683 PAMP19021 973 aa17.63■□□□□ 0.41
HERC3-205ENST00000426683 LIMK2P53671 638 aa17.63■□□□□ 0.41
HERC3-205ENST00000426683 ANKRD20A4Q4UJ75 823 aa17.63■□□□□ 0.41
HERC3-205ENST00000426683 CAPRIN2Q6IMN6 1127 aaKnown RBP17.63■□□□□ 0.41
HERC3-205ENST00000426683 ZNF449Q6P9G9 518 aa17.63■□□□□ 0.41
HERC3-205ENST00000426683 RAB11FIP2Q7L804 512 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms