RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 MRPS34P82930 218 aaKnown RBP6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 ODF3L2Q3SX64 289 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 DCAF12L2Q5VW00 463 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 KRT77Q7Z794 578 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 SRRM1Q8IYB3 904 aaKnown RBP6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 MMP21Q8N119 569 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 TRPC4APQ8TEL6 797 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 LPAR1Q92633 364 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 ABHD1Q96SE0 405 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 TMEM39BQ9GZU3 492 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 ISCUQ9H1K1 167 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 HRH4Q9H3N8 390 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 WDR26Q9H7D7 661 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 ZBTB40Q9NUA8 1239 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 TMEM51Q9NW97 253 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 GIMAP2Q9UG22 337 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 EXO1Q9UQ84 846 aaKnown RBP6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 MAGED1Q9Y5V3 778 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 CLIC4Q9Y696 253 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 PLXNB2O15031 1838 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 RLFQ13129 1914 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 AKR1B15C9JRZ8 316 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 SOX30O94993 753 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 PRF1P14222 555 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 CCND3P30281 292 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 PIGAP37287 484 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 MMP14P50281 582 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 HMGA2P52926 109 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 RAD23BP54727 409 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 MYBPC2Q14324 1141 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 SRSF7Q16629 238 aaKnown RBP eCLIP6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 MTX3Q5HYI7 312 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 WASHC2DQ5SRD0 308 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 RARS2Q5T160 578 aaKnown RBP6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 Q6ZSV7 163 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 MON1BQ7L1V2 547 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 DNAAF5Q86Y56 855 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 PALB2Q86YC2 1186 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 CERS5Q8N5B7 392 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 ZNF548Q8NEK5 533 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 URB1-AS1Q96HZ7 61 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 PCGF1Q9BSM1 259 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 THUMPD2Q9BTF0 503 aaKnown RBP6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 AP1M1Q9BXS5 423 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 MRPL1Q9BYD6 325 aaKnown RBP6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 KCNN2Q9H2S1 579 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 KRCC1Q9NPI7 259 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 GPR108Q9NPR9 543 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 PAG1Q9NWQ8 432 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 FBXW11Q9UKB1 542 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 R3HDM2Q9Y2K5 976 aaKnown RBP6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 HS3ST3B1Q9Y662 390 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 CEP250Q9BV73 2442 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 MED23Q9ULK4 1368 aa6.31□□□□□ -1.4
HMGB1P32-201ENST00000425971 ASPMQ8IZT6 3477 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 TECTAO75443 2155 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 MS4A18H0YCH9 400 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 ATP2A1O14983 1001 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 ANXA7P20073 488 aaKnown RBP6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 RRP1P56182 461 aaKnown RBP6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 TNFAIP1Q13829 316 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 BAATQ14032 418 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 PTGR1Q14914 329 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 MANEAQ5SRI9 462 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 KRT79Q5XKE5 535 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 METTL2BQ6P1Q9 378 aaKnown RBP6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 ASCL5Q7RTU5 278 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 SPATA6LQ8N4H0 392 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 KCTD6Q8NC69 237 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 C7orf57Q8NEG2 295 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 METTL2AQ96IZ6 378 aaKnown RBP6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 EGLN2Q96KS0 407 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 GCNAQ96QF7 691 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 GAD1Q99259 594 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 PAFAH2Q99487 392 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 BAG1Q99933 345 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 CATSPERBQ9H7T0 1116 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 OR6C3Q9NZP0 311 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 EP300Q09472 2414 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 GBF1Q92538 1859 aa6.3□□□□□ -1.4
HMGB1P32-201ENST00000425971 LY6G6EA0A0G2JKS1 128 aa6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 KDM4EB2RXH2 506 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 TCP10L2B9ZVM9 353 aa6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 J3KR12 359 aa6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 ADAMDEC1O15204 470 aa6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 DCXO43602 365 aa6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 DDX5P17844 614 aaKnown RBP6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 TRIM21P19474 475 aaKnown RBP6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 TBXAS1P24557 533 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 CD38P28907 300 aa6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 ME1P48163 572 aa6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 RFX5P48382 616 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 PPATQ06203 517 aa6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 CDC16Q13042 620 aa6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 TRAF1Q13077 416 aa6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 CTTNQ14247 550 aaKnown RBP6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 GPR18Q14330 331 aa6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 NEDD9Q14511 834 aa6.29□□□□□ -1.4
HMGB1P32-201ENST00000425971 TMEM266Q2M3C6 531 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms