RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 TCAF1Q9Y4C2 921 aa17.54■□□□□ 0.4
IGHV3-47-201ENST00000425060 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 TCRBV7S3A2A0A539 114 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 AGRPO00253 132 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 CES2O00748 559 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 KIF5CO60282 957 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 C9P02748 559 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 FGF3P11487 239 aaPredicted RBP17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 TPSB2P20231 275 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 PBLDP30039 288 aaPredicted RBP17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 COILP38432 576 aaPredicted RBP17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 HALP42357 657 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 MAGEA6P43360 314 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 ABCG1P45844 678 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 BASP1P80723 227 aaKnown RBP17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 TLE3Q04726 772 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 GPR18Q14330 331 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 TPSAB1Q15661 275 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 PCID2Q5JVF3 399 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 CAPRIN2Q6IMN6 1127 aaKnown RBP17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 ZNF534Q76KX8 674 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 NLRP9Q7RTR0 991 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 TRIM48Q8IWZ4 208 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 LILRA3Q8N6C8 439 aaPredicted RBP17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 GPR150Q8NGU9 434 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 ANP32BQ92688 251 aaKnown RBP17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 MAGOHBQ96A72 148 aaKnown RBP17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 CXorf40BQ96DE9 158 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 CRELD1Q96HD1 420 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 SGSM3Q96HU1 749 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 INSM2Q96T92 566 aaPredicted RBP17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 AP1M1Q9BXS5 423 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 B3GNT4Q9C0J1 378 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 SNX12Q9UMY4 172 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 LHX6Q9UPM6 363 aa17.53■□□□□ 0.4
IGHV3-47-201ENST00000425060 ITPR1Q14643 2758 aa17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 MN1Q10571 1320 aaPredicted RBP17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 C9orf172C9J069 976 aa17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 PGRMC1O00264 195 aaKnown RBP17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 UBXN7O94888 489 aa17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 GOT2P00505 430 aaKnown RBP17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 MAPK9P45984 424 aa17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 CDK16Q00536 496 aa17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 ITIH4Q14624 930 aa17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 KCNJ11Q14654 390 aa17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 TRIP13Q15645 432 aaPredicted RBP17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 CFAP206Q8IYR0 622 aa17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 CLDN19Q8N6F1 224 aa17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 AGBL5Q8NDL9 886 aa17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 SPDYE1Q8NFV5 336 aaPredicted RBP17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 HM13Q8TCT9 377 aa17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 KCNE4Q8WWG9 221 aa17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 USP7Q93009 1102 aa17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 NAF1Q96HR8 494 aaKnown RBP17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 NAP1L3Q99457 506 aaPredicted RBP17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 DPH1Q9BZG8 443 aa17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 WWP1Q9H0M0 922 aa17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 CHRAC1Q9NRG0 131 aa17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 AKAP7Q9P0M2 348 aaPredicted RBP17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 PRSS21Q9Y6M0 314 aa17.52■□□□□ 0.4
IGHV3-47-201ENST00000425060 AP2A2O94973 939 aa17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 KRT14P02533 472 aa17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 MTHFD1P11586 935 aaKnown RBP17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 NSG1P42857 185 aa17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 NPY2RP49146 381 aa17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 SESN2P58004 480 aaPredicted RBP17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 LRRC8BQ6P9F7 803 aa17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 AFTPHQ6ULP2 937 aa17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 PACS1Q6VY07 963 aa17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 BMPERQ8N8U9 685 aa17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 RMDN2Q96LZ7 410 aa17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 CCM2Q9BSQ5 444 aa17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 IL22Q9GZX6 179 aa17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 COG4Q9H9E3 785 aa17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 TREX1Q9NSU2 369 aa17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 OCIAD1Q9NX40 245 aa17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 EPHA6Q9UF33 1036 aa17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 PYCARDQ9ULZ3 195 aa17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 PTPRQQ9UMZ3 2332 aa17.51■□□□□ 0.39
IGHV3-47-201ENST00000425060 AP3B1O00203 1094 aa17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 ZNF185O15231 689 aa17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 PRAMEF10O60809 474 aa17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 POLBP06746 335 aa17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 ANKRD34CP0C6C1 535 aa17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 TYRP1P17643 537 aa17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 CSTF2P33240 577 aaKnown RBP eCLIP17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 CAPZBP47756 277 aa17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 MAPK10P53779 464 aa17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 GFERP55789 205 aa17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 CRADDP78560 199 aa17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 GPS1Q13098 491 aa17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 SEMA3AQ14563 771 aa17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 CCDC137Q6PK04 289 aaKnown RBP17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 JAMLQ86YT9 394 aa17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 PLXDC1Q8IUK5 500 aa17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 PPHLN1Q8NEY8 458 aaKnown RBP17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 OR4L1Q8NH43 312 aa17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 ZFPM2Q8WW38 1151 aa17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 RSC1A1Q92681 617 aa17.5■□□□□ 0.39
IGHV3-47-201ENST00000425060 PMEPA1Q969W9 287 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms