RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 RNASEH2BQ5TBB1 312 aaKnown RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 C6orf163Q5TEZ5 329 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 PRAMEF8Q5VWM4 474 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 AFMIDQ63HM1 303 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 PMS2CLQ68D20 193 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 DHRS7BQ6IAN0 325 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 OR6B2Q6IFH4 312 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 CCDC144NLQ6NUI1 221 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 EFCAB12Q6NXP0 572 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 ERICH5Q6P6B1 374 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 GJB7Q6PEY0 223 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 CES3Q6UWW8 571 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 LAYNQ6UX15 382 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 ARHGEF19Q8IW93 802 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 FAM9CQ8IZT9 166 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 GBP7Q8N8V2 638 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 OR2T34Q8NGX1 318 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 OR10T2Q8NGX3 314 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 OR52J3Q8NH60 311 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 B4GALNT2Q8NHY0 566 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 DNAJB14Q8TBM8 379 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 SLC22A8Q8TCC7 542 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 TFAP2CQ92754 450 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 DPF1Q92782 380 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 EXT2Q93063 718 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 RASD2Q96D21 266 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 PGM2Q96G03 612 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 MSANTD3Q96H12 275 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 SLC46A1Q96NT5 459 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 PSKH2Q96QS6 385 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 PIGQQ9BRB3 760 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 WDR83Q9BRX9 315 aaKnown RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 GLIS2Q9BZE0 524 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 CRNKL1Q9BZJ0 848 aaKnown RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 FAM192AQ9GZU8 254 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 NACA2Q9H009 215 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 ATG10Q9H0Y0 220 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 P2RY12Q9H244 342 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 VCX2Q9H322 139 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 PDZD7Q9H5P4 517 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 NOL11Q9H8H0 719 aaKnown RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 CNOT10Q9H9A5 744 aaKnown RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 RPF1Q9H9Y2 349 aaKnown RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 USP29Q9HBJ7 922 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 PNPLA3Q9NST1 481 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 SETD4Q9NVD3 440 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 PRMT7Q9NVM4 692 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 FAM120CQ9NX05 1096 aaKnown RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 P4HTMQ9NXG6 502 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 BARHL2Q9NY43 387 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 TBC1D7Q9P0N9 293 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 KIAA1456Q9P272 454 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 ABI3Q9P2A4 366 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 KLHL8Q9P2G9 620 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 ANKFY1Q9P2R3 1169 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 ZNHIT2Q9UHR6 403 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 RAB21Q9UL25 225 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 ZNF148Q9UQR1 794 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 MAP3K2Q9Y2U5 619 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 PCDHB7Q9Y5E2 793 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 PNPLA7Q6ZV29 1317 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 ATRNL1Q5VV63 1379 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 OR6C74A6NCV1 312 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 SLC15A5A6NIM6 579 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 NPIPB13A6NJU9 1138 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 MAGEB17A8MXT2 336 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 CXorf49A8MYA2 514 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-205ENST00000424674 NPIPB4C9JG80 1138 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 SPECC1L-ADORA2AF8WAN1 911 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 K7ERQ8 282 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 M0QYT0 321 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 SLC16A3O15427 465 aaKnown RBP3.66□□□□□ -1.82
SF3B1-205ENST00000424674 ST8SIA3O43173 380 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 LRRTM2O43300 516 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 TRIM3O75382 744 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-205ENST00000424674 CTAG2O75638 210 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 PDE9AO76083 593 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 WDR47O94967 919 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 NDUFA10O95299 355 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 BCL10O95999 233 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 CHRNA1P02708 482 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 PGK2P07205 417 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 CSF1RP07333 972 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 CHRM2P08172 466 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 CYP3A4P08684 503 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 LINGO3P0C6S8 592 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 HGFP14210 728 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 GJA1P17302 382 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 GNAZP19086 355 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 DRD1P21728 446 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 KCNA3P22001 575 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 SLC6A2P23975 617 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 ACAT1P24752 427 aaKnown RBP3.66□□□□□ -1.82
SF3B1-205ENST00000424674 PKLRP30613 574 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 CDAP32320 146 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 HTR7P34969 479 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 CETN2P41208 172 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 MAGEA1P43355 309 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 AVPR1BP47901 424 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 GNAQP50148 359 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms