RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 ZNF605Q86T29 641 aa18.08■□□□□ 0.48
NUP50-207ENST00000424634 ZSCAN1Q8NBB4 408 aa18.08■□□□□ 0.48
NUP50-207ENST00000424634 TTC13Q8NBP0 860 aa18.08■□□□□ 0.48
NUP50-207ENST00000424634 ZNF514Q96K75 400 aaPredicted RBP18.08■□□□□ 0.48
NUP50-207ENST00000424634 INSM2Q96T92 566 aaPredicted RBP18.08■□□□□ 0.48
NUP50-207ENST00000424634 TMEM184BQ9Y519 407 aaPredicted RBP18.08■□□□□ 0.48
NUP50-207ENST00000424634 CFAP20Q9Y6A4 193 aaKnown RBP18.08■□□□□ 0.48
NUP50-207ENST00000424634 TLN1Q9Y490 2541 aaKnown RBP18.07■□□□□ 0.48
NUP50-207ENST00000424634 GOLGA6L9A6NEM1 432 aa18.07■□□□□ 0.48
NUP50-207ENST00000424634 MGAT4DA6NG13 374 aa18.07■□□□□ 0.48
NUP50-207ENST00000424634 POLR1CO15160 346 aaPredicted RBP18.07■□□□□ 0.48
NUP50-207ENST00000424634 TOX3O15405 576 aaPredicted RBP18.07■□□□□ 0.48
NUP50-207ENST00000424634 PLA2G2AP14555 144 aa18.07■□□□□ 0.48
NUP50-207ENST00000424634 TPH1P17752 444 aa18.07■□□□□ 0.48
NUP50-207ENST00000424634 CDKN1CP49918 316 aaPredicted RBP18.07■□□□□ 0.48
NUP50-207ENST00000424634 ARHGEF18Q6ZSZ5 1173 aa18.07■□□□□ 0.48
NUP50-207ENST00000424634 FAM92BQ6ZTR7 304 aa18.07■□□□□ 0.48
NUP50-207ENST00000424634 LILRA3Q8N6C8 439 aaPredicted RBP18.07■□□□□ 0.48
NUP50-207ENST00000424634 OR2L2Q8NH16 312 aa18.07■□□□□ 0.48
NUP50-207ENST00000424634 RNF31Q96EP0 1072 aa18.07■□□□□ 0.48
NUP50-207ENST00000424634 ZPBPQ9BS86 351 aa18.07■□□□□ 0.48
NUP50-207ENST00000424634 TMEM121Q9BTD3 319 aa18.07■□□□□ 0.48
NUP50-207ENST00000424634 WWP1Q9H0M0 922 aa18.07■□□□□ 0.48
NUP50-207ENST00000424634 ZNF768Q9H5H4 540 aaKnown RBP18.07■□□□□ 0.48
NUP50-207ENST00000424634 EPHA6Q9UF33 1036 aa18.07■□□□□ 0.48
NUP50-207ENST00000424634 LOC101059948A0A1B0GTJ6 334 aa18.06■□□□□ 0.48
NUP50-207ENST00000424634 STK17BO94768 372 aa18.06■□□□□ 0.48
NUP50-207ENST00000424634 PTMAP06454 111 aaKnown RBP18.06■□□□□ 0.48
NUP50-207ENST00000424634 ZNF28P17035 718 aa18.06■□□□□ 0.48
NUP50-207ENST00000424634 PDE1BQ01064 536 aa18.06■□□□□ 0.48
NUP50-207ENST00000424634 FOXM1Q08050 763 aa18.06■□□□□ 0.48
NUP50-207ENST00000424634 BCL7AQ4VC05 210 aa18.06■□□□□ 0.48
NUP50-207ENST00000424634 CACHD1Q5VU97 1274 aa18.06■□□□□ 0.48
NUP50-207ENST00000424634 PRSS42Q7Z5A4 293 aa18.06■□□□□ 0.48
NUP50-207ENST00000424634 UNC5BQ8IZJ1 945 aa18.06■□□□□ 0.48
NUP50-207ENST00000424634 NLGN4XQ8N0W4 816 aa18.06■□□□□ 0.48
NUP50-207ENST00000424634 NXPE1Q8N323 547 aa18.06■□□□□ 0.48
NUP50-207ENST00000424634 TAB3Q8N5C8 712 aaPredicted RBP18.06■□□□□ 0.48
NUP50-207ENST00000424634 SPDYE1Q8NFV5 336 aaPredicted RBP18.06■□□□□ 0.48
NUP50-207ENST00000424634 NLGN4YQ8NFZ3 816 aaPredicted RBP18.06■□□□□ 0.48
NUP50-207ENST00000424634 KLHL6Q8WZ60 621 aa18.06■□□□□ 0.48
NUP50-207ENST00000424634 DNAJC1Q96KC8 554 aaKnown RBP18.06■□□□□ 0.48
NUP50-207ENST00000424634 LINC00615Q96LM1 132 aaPredicted RBP18.06■□□□□ 0.48
NUP50-207ENST00000424634 PPP1R2P1Q96PQ5 205 aa18.06■□□□□ 0.48
NUP50-207ENST00000424634 C19orf43Q9BQ61 176 aa18.06■□□□□ 0.48
NUP50-207ENST00000424634 RAB33BQ9H082 229 aa18.06■□□□□ 0.48
NUP50-207ENST00000424634 FAM8A1Q9UBU6 413 aa18.06■□□□□ 0.48
NUP50-207ENST00000424634 FEZ2Q9UHY8 353 aaPredicted RBP18.06■□□□□ 0.48
NUP50-207ENST00000424634 TENM4Q6N022 2769 aa18.06■□□□□ 0.48
NUP50-207ENST00000424634 PIKFYVEQ9Y2I7 2098 aa18.05■□□□□ 0.48
NUP50-207ENST00000424634 ZNF189O75820 626 aaPredicted RBP18.05■□□□□ 0.48
NUP50-207ENST00000424634 RASSF9O75901 435 aa18.05■□□□□ 0.48
NUP50-207ENST00000424634 DLGAP3O95886 979 aa18.05■□□□□ 0.48
NUP50-207ENST00000424634 PRSS56P0CW18 603 aa18.05■□□□□ 0.48
NUP50-207ENST00000424634 MTHFD1P11586 935 aaKnown RBP18.05■□□□□ 0.48
NUP50-207ENST00000424634 MAP4P27816 1152 aaKnown RBP18.05■□□□□ 0.48
NUP50-207ENST00000424634 IRGCQ6NXR0 463 aa18.05■□□□□ 0.48
NUP50-207ENST00000424634 DUS1LQ6P1R4 473 aaKnown RBP18.05■□□□□ 0.48
NUP50-207ENST00000424634 SNX20Q7Z614 316 aa18.05■□□□□ 0.48
NUP50-207ENST00000424634 TXLNBQ8N3L3 684 aa18.05■□□□□ 0.48
NUP50-207ENST00000424634 RNF10Q8N5U6 811 aaKnown RBP18.05■□□□□ 0.48
NUP50-207ENST00000424634 ATG4AQ8WYN0 398 aa18.05■□□□□ 0.48
NUP50-207ENST00000424634 ZDHHC12Q96GR4 267 aa18.05■□□□□ 0.48
NUP50-207ENST00000424634 OR6C1Q96RD1 312 aa18.05■□□□□ 0.48
NUP50-207ENST00000424634 IMP3Q9NV31 184 aaKnown RBP18.05■□□□□ 0.48
NUP50-207ENST00000424634 PIH1D1Q9NWS0 290 aaKnown RBP18.05■□□□□ 0.48
NUP50-207ENST00000424634 SEMA5BQ9P283 1151 aa18.05■□□□□ 0.48
NUP50-207ENST00000424634 CRLS1Q9UJA2 301 aa18.05■□□□□ 0.48
NUP50-207ENST00000424634 ACSL5Q9ULC5 683 aa18.05■□□□□ 0.48
NUP50-207ENST00000424634 IGHV5-51A0A0C4DH38 117 aa18.04■□□□□ 0.48
NUP50-207ENST00000424634 B8ZZF3 427 aa18.04■□□□□ 0.48
NUP50-207ENST00000424634 POLBP06746 335 aa18.04■□□□□ 0.48
NUP50-207ENST00000424634 FAM87AP0C7U9 286 aa18.04■□□□□ 0.48
NUP50-207ENST00000424634 ITGB6P18564 788 aa18.04■□□□□ 0.48
NUP50-207ENST00000424634 MC4RP32245 332 aa18.04■□□□□ 0.48
NUP50-207ENST00000424634 HADHAP40939 763 aa18.04■□□□□ 0.48
NUP50-207ENST00000424634 CAPRIN2Q6IMN6 1127 aaKnown RBP18.04■□□□□ 0.48
NUP50-207ENST00000424634 CFAP206Q8IYR0 622 aa18.04■□□□□ 0.48
NUP50-207ENST00000424634 ULK4Q96C45 1275 aa18.04■□□□□ 0.48
NUP50-207ENST00000424634 DCUN1D1Q96GG9 259 aa18.04■□□□□ 0.48
NUP50-207ENST00000424634 C12orf66Q96MD2 445 aa18.04■□□□□ 0.48
NUP50-207ENST00000424634 LRRC40Q9H9A6 602 aa18.04■□□□□ 0.48
NUP50-207ENST00000424634 NLE1Q9NVX2 485 aaPredicted RBP18.04■□□□□ 0.48
NUP50-207ENST00000424634 IL17BQ9UHF5 180 aa18.04■□□□□ 0.48
NUP50-207ENST00000424634 IGLV3-16A0A075B6K0 115 aa18.03■□□□□ 0.48
NUP50-207ENST00000424634 TRBV5-4A0A0C4DH59 114 aa18.03■□□□□ 0.48
NUP50-207ENST00000424634 H7C0S8 307 aa18.03■□□□□ 0.48
NUP50-207ENST00000424634 NKX2-8O15522 239 aa18.03■□□□□ 0.48
NUP50-207ENST00000424634 AP2A1O95782 977 aa18.03■□□□□ 0.48
NUP50-207ENST00000424634 ATP1B2P14415 290 aaPredicted RBP18.03■□□□□ 0.48
NUP50-207ENST00000424634 NELFEP18615 380 aaKnown RBP18.03■□□□□ 0.48
NUP50-207ENST00000424634 ITGALP20701 1170 aa18.03■□□□□ 0.48
NUP50-207ENST00000424634 PRLHRP49683 370 aa18.03■□□□□ 0.48
NUP50-207ENST00000424634 ABHD18Q0P651 414 aa18.03■□□□□ 0.48
NUP50-207ENST00000424634 POU6F1Q14863 301 aa18.03■□□□□ 0.48
NUP50-207ENST00000424634 ZNF658BQ4V348 819 aaPredicted RBP18.03■□□□□ 0.48
NUP50-207ENST00000424634 SERPINA9Q86WD7 417 aa18.03■□□□□ 0.48
NUP50-207ENST00000424634 CDKN2AIPNLQ96HQ2 116 aa18.03■□□□□ 0.48
NUP50-207ENST00000424634 ELMO2Q96JJ3 720 aa18.03■□□□□ 0.48
NUP50-207ENST00000424634 SLC45A3Q96JT2 553 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms